OCCAM preprints and publications

This is the list of all OCCAM Papers to date in reverse chronological order. For more information or to request a copy please contact occam-admin [-at-] maths [dot] ox [dot] ac [dot] uk.

To go directly to preprints from a previous year please use these links:

Note that the articles below are the submitted manuscripts. For final versions please follow the link to the corresponding journal webpage.

2013 Preprints and publications

[13/31]
Pestana, J.: On the eigenvalues and eigenvectors of nonsymmetric saddle point matrices preconditioned by block triangular matrices:

[13/30]
Zhou, X.; Bueno-Orovio A.; Orini, M.; Hanson, B.; Haywood, M.; Taggart, P.; Lambiase, P.; Burrage, K.; Rodriguez, B.: Population of human ventricular cell models calibrated with in vivo measurements unravels ionic mechanisms of cardiac alternans:

[13/29]
Wallman, M.; Bueno-Orovio, A.; Rodriguez, B.: Computational probabilistic quantification of pro-arrhythmic risk from scar and left-to-right heterogeneity in the human ventricles:

[13/28]
Zhu, S.-X.; Gu, T.-X., Liu, X.-P.: Minimizing synchronizations in sparse iterative solvers for distributed supercomputers:

[13/27]
März, T.: A well-posedness framework for inpainting based on coherence transport:

[13/26]
Gadêlha, H.; Gaffney, E.A.; Goriely, A.: The counterbend phenomenon: a generic property of the axoneme and cross-linked filament bundles:

[13/25]
O'Keeffe S. G., Moulton D. E., Waters S. L., Goriely A.: Growth-induced axial buckling of a slender elastic filament embedded in an isotropic elastic matrix:

[13/24]
Woolley, T.E.; Gaffney, E.A.; Oliver, J.M.; Baker, R.E.; Waters, S.L.; Goriely, A.: Cellular blebs: pressure-driven, axisymmetric, membrane protrusions:

[13/23]
Bueno-Orovio, A.; Sánchez, C.; Pueyo, E.; Rodriguez, B.: Na/K pump regulation of cardiac repolarization: Insights from a systems biology approach:

[13/22]
Farrell, P.; Wendland, H.: RBF multiscale collocation for second order elliptic boundary value problems:

[13/21]
Duffy, B.; Thiyagalingam, J.; Walton, S.; Smith, D.J.; Trefethen, A.; Kirkman-Brown, J.C.; Gaffney, E.A.; Chen, M.: Glyph-based video visualization for semen analysis

[13/20]
Thiyagalingam, J.; Walton, S.; Duffy, B.; Trefethen, A.; Chen, M.: Complexity plots:

[13/19]
Kimpton, L.S.; Whiteley, J.P.; Waters, S.L.; Oliver, J.M.: On a poroviscoelastic model for cell crawling:

[13/18]
Herterich, J.G.; Griffiths, I.M.; Field, R.W.; Vella, D.: The effect of a concentration-dependent viscosity on particle transport in a channel flow with porous walls:

[13/17]
Knoche, S.; Vella, D.; Aumaitre, E.; Degen, P.; Rehage, H.; Cicuta, P.; Kierfeld, J.: Elastometry of deflated capsules: elastic moduli from shape and wrinkle analysis:

[13/16]
Britton, O.J.; Bueno-Orovio, A.; Van Ammel, K.; Lu, H.R.; Towart, R.; Gallacher, D.J.; Rodriguez, B.: Experimentally-calibrated population of models predicts and explains inter-subject variability in cardiac cellular electrophysiology:

[13/15]
Cotter, S.L.; Klika, V.; Kimpton, L.S.; Collins, S.L.; Heazell, A.E.P.: A stochastic model for early placental development:

[13/14]
Yatim, Y.M.; Duffy, B.R.; Wilson, S.K.: Travelling-wave similarity solutions for a steadily translating slender dry patch in a thin fluid film:

[13/13]
Paterson, C.; Wilson, S.K.; Duffy, B.R.: Pinning, de-pinning and re-pinning of a slowly varying rivulet:

[13/12]
Wagner, T.J.W.; Vella, D.: Switch on, switch off: stiction in nanoelectromechanical switches:

[13/11]
Đuričković, B.; Goriely, A.; Maddocks, J.H.: Twist and stretch of helices: all you need is Love

[13/10]
Schroll, R.D.; Adda-Bedia, M.; Cerda, E.; Huang, J.; Menon, N.; Russell, T.P.; Toga, K.B.; Vella, D.; Davidovitch, B.: Capillary deformations of bendable films:

[13/09]
Sotiris, A.; Prokopiou, S.A.; Byrne, H.M.; Jeffrey, M.R.; Robinson, R.S.; Mann, G.E.; Owen, M.R.: Mathematical analysis of a model for the growth of the bovine corpus luteum:

[13/08]
Bruna, M.; Chapman, S.J.: Diffusion of finite-size particles in confined geometries:

[13/07]
Knox, D.J.; Wilson, S.K.; Duffy, B.R.; McKee, S.: Porous squeeze-film flow:

[13/06]
Biddle, H.; von Glehn, I.; Macdonald, C.B.; März, T.: A volume-based method for denoising on curved surfaces:

[13/05]
Macdonald, C.B.; Merriman, B.; Ruuth, S.J.: Simple computation of reaction-diffusion processes on point clouds:

[13/04]
Ketcheson, D.I.; Macdonald, C.B.; Ruuth, S.J.: Spatially partitioned embedded Runge-Kutta Methods:

[13/03]
Holland, M.A.; Kosmata,T.; Goriely, A.; Kuhl, E.: On the mechanics of thin films and growing surfaces:

[13/02]
Marston, J.O.; Sprittles, J.E.; Zhu, Y.; Li, E.Q.; Vakarelski, I.U.; Thoroddsen, S.T.: Drop spreading and penetration into pre-wetted powders

[13/01]
Goriely, A.; Tabor, M.: Rotation, inversion, and perversion in anisotropic elastic cylindrical tubes and membranes:


2012 Preprints and publications

Top of page

[12/115]
Moulton D. E., Goriely A.: Mathematicians at the Movies: Sherlock Holmes vs. Professor Moriarty:

[12/114]
Rockstroh P., März T., Ruuth S. J.: An embedding technique for the solution of reaction-diffusion equations on algebraic surfaces with isolated singularities:

[12/113]
Bosch J., Stoll M., Benner P.: Fast solution of Cahn-Hilliard variational inequalities using implicit time discretization and finite elements:

[12/112]
Muraro D., Pound M., Help H., Lucas M., Chopard J., Byrne H., Godin C., Hodgman C., King J., Pridmore T., Helariutta Y., Bennett M., Bishopp A.: The integration of hormonal signaling networks and mobile microRNAs is required for vascular patterning in Arabidopsis roots

[12/111]
Jain H. V., Richardson A., Meyer-Hermann M., Byrne H. M.: Exploiting the synergy between carboplatin and ABT-737 in the treatment of ovarian carcinomas

[12/110]
Erban R., Flegg M. B., Papoian G. A.: Multiscale stochastic reaction-diffusion modelling: application to actin dynamics in filopodia

[12/109]
Melnik A. V., Goriely A.: Dynamics of mechanically induced fiber reorientation in the material reinforced by two families of fibers

[12/108]
Tavener S., Wildey T.: Adjoint based a posteriori analysis of multiscale mortar discretizations with multinumerics:

[12/107]
Sprittles J. E., Shikhmurzaev Y. D.: Coalescence of Liquid Drops Different Models Versus Experiment: Physics of Fluids

[12/106]
Paetsch C., Dorfmann L.: Non-linear modeling of active biohybrid materials

[12/105]
Pancheri F. Q., Dorfmann L.: Strain controlled biaxial stretch: An experimental characterization of natural rubber

[12/104]
Moore M. R., Ockendon J. R., Oliver J. M.: Air-cushioning in impact problems:

[12/103]
Griffiths I. M., Howell P. D., Shipley R. J.: Control and optimization of solute transport in a porous tube:

[12/102]
Allen R., Reis T., Sun S.: A new Lattice Boltzmann equation to simulate density-driven convection of carbon dioxide:

[12/101]
Tsai S. S. H., Griffiths I. M., Stone H. A.: Microfluidic immunomagnetic multi-target sorting – a model for controlling deflection of paramagnetic beads: Lab on a Chip

[12/100]
Bueno-Orovio A., Kay D., Grau V., Rodriguez B.: Nonlocal models of electrical propagation in cardiac tissue electrotonic effects and the modulated dispersion of repolarization: (OCCAM Technical Report)

[12/99]
Wake G. C., Byrne H. M.: Calculus from the past: multiple delay systems arising in cancer cell modelling:

[12/98]
deBotton G., Bustamante R., Dorfmann A.: Axisymmetric bifurcations of thick spherical shells under inflation and compression: International

[12/97]
Muraro D., Voß U., Wilson M., Bennett M., Byrne H. M., de Smet I., Hodgman C., King J.: Inference of the genetic network regulating lateral root initiation in Arabidopsis thaliana:

[12/96]
Byrne H. M.: Mathematical biomedicine and modeling avascular tumor growth

[12/95]
Figueredo G., Joshi T., Osborne J., Byrne H. M., Owen M.: On-lattice agent-based simulation of populations of cells within the open-source chaste framework:

[12/94]
Hall C. L., Vella D., Goriely A.: The mechanics of a chain or ring of spherical magnets:

[12/93]
Bruna M., Chapman S. J.: Diffusion of multiple species with excluded-volume effects:   Journal of Chemical Physics

[12/92]
Curtis M. P., Gaffney E. A.: The three sphere swimmer in a nonlinear viscoelastic medium:

[12/91]
Majumdar A., Pisante A., Henao D.: Biaxial defect cores in nematic equilibria an asymptotic result:

[12/90]
Majumdar A., Ockendon J. R., Howell P. D., Surovyatkina E.: Transitions through Critical Temperatures in Nematic Liquid Crystals:

[12/89]
Vigolo D., Griffiths I. M., Radl S., Stone H. A.: An experimental and theoretical investigation of particle–wall impacts in a T-junction:

[12/88]
Morgan C. E., Breward C. J. B., Griffiths I. M., Howell P. D., Penfold J., Thomas R. K., Tucker I., Petkov J. T., Webster J. R. P.: The kinetics of surfactant desorption at the air–solution interface: Langmuir

[12/87]
Taroni M., Breward C. J. W., Cummings L. J., Griffiths I. M.: Asymptotic solutions of glass temperature profiles during steady optical fibre drawing:

[12/86]
Lovrics A., Yu G., Juhász B., Bock I., Byrne H. M., Dinnyés A., Kovács K. A.: Boolean modelling reveals new regulatory connections between transcription factors orchestrating the development of the ventral spinal cord:

[12/85]
Schlackow M., Marguerat S., Proudfoot N. J., Bähler J., Erban R., Gullerova M.: Global and Functional Analyses of 3’ UTRs in Schizosaccharomyces pombe:

[12/84]
Mirams G. R., Arthurs C. J., Bernabeu M. O., Bordas R., Cooper J., Corrias A., Davit Y., Dunn S.-J., Fletcher A. G., Harvey D. G, Marsh M. E., Osborne J. M., Pathmanathan P., Pitt-Francis J., Southern J., Zemzemi N., Gavaghan D. J.: Chaste: an open source C++ library for computational physiology and biology:

[12/83]
Connor A. J., Cooper J., Byrne H. M., Maini P. K., McKeever S.: Object-oriented paradigms for modelling vascular tumour growth: a case study:

[12/82]
Griffiths I. M., Breward C. J. W., Colegate D. M., Dellar P. J., Howell P. D., Bain C. D.: A new pathway for the re-equilibration of micellar surfactant solutions: Soft Matter

[12/81]
 
[12/80]
 
[12/79]
 
[12/78]
 
[12/77]
 
[12/76]
Bell C. G., Byrne H. M., Whiteley J. P., Waters S. L.: A note on heat and mass transfer from a sphere in Stokes flow at low Péclet number:

[12/75]
Whiteley J. P., Tavener S. J.: Error estimation and adaptivity for incompressible, non–linear (hyper–)elasticity:

[12/74]
Majumdar A., Goriely A.: Static and dynamic stability results for a class of three-dimensional configurations of Kirchhoff elastic rods:

[12/73]
Furati K. M.: Bounds on the solution of a Cauchy-type problem involving a weighted sequential fractional derivative

[12/72]
Güttel S., Pestana J.: Some observations on weighted GMRES:

[12/71]
Goriely A., Moulton D.: The Mathematics Behind Sherlock Holmes: A Game of Shadows: SIAM News

[12/70]
McNamara H.: An estimate of energy dissipation due to soil-moisture hysteresis:

[12/69]
Cross R., McNamara H., Kalachev L., Pokrovskii A.: Memory of recessions: Journal of Post Keynesian Economics

[12/68]
Vella D., Ajdari A., Vaziri A., Boudaoud A.: Indentation of ellipsoidal and cylindrical elastic shells: Physical Review Letters

[12/67]
Aumaitre E., Knoche S., Cicuta P., Vella D.: Wrinkling in the deflation of elastic bubbles: The European Physical Journal E

[12/66]
Moulton D. E., Lessinnes T., Goriely A.: Morphoelastic rods Part 1: A single growing elastic rod: Journal of the Mechanics and Physics of Solids

[12/65]
Hadjimichael Y., Macdonald C. B., Ketcheson D. I., Verner J. H.: Effective order strong stability preserving Runge–Kutta methods:

[12/64]
Menon S. N., Hall C. L., McCue S. W., McElwain D. L. S.: A model for one-dimensional morphoelasticity and its application to fibroblast-populated collagen lattices:

[12/63]
Muraro D., Byrne H. M., King J. R., Bennett M. J.: Mathematical modelling plant signalling networks:

[12/62]
Soulaine C., Davit Y., Quintard M.: A two-pressure model for slightly compressible single phase flow in bi-structured porous media:

[12/61]
Leslie G. A., Wilson S. K., Duffy B. R.: Three-dimensional coating and rimming flow: a ring of fluid on a rotating horizontal cylinder: Journal of Fluid Mechanics

[12/60]
Chen W., Erban R., Chapman S. J.: From Brownian dynamics to Markov chain: an ion channel example:

[12/59]
Mihai L. A., Goriely A.: Numerical simulation of shear and the Poynting effects by the finite element method: An application of the generalised empirical inequalities in non-linear elasticity:

[12/58]
Franz B., Flegg M. B., Chapman S. J., Erban R.: Multiscale reaction-diffusion algorithms: pde-assisted Brownian dynamics:

[12/57]
Zhu S.-X.: Compactly supported radial basis functions: how and why?:

[12/56]
Shikhmurzaev Y. D., Sprittles J. E.: On the anomalous dynamics of capillary rise in porous media: Physical Review E

[12/55]
Leslie G. A., Wilson S. K., Duffy B. R.: Thermoviscous coating and rimming flow: Quarterly Journal of Mechanics and Applied Mathematics

[12/54]
McArdle C. R., Pritchard D., Wilson S. K.: The Stokes boundary layer for a thixotropic or antithixotropic fluid:  Journal of Non-Newtonian Fluid Mechanics

[12/53]
Sullivan J. M., Paterson C., Wilson S. K., Duffy B. R.: A thin rivulet or ridge subject to a uniform transverse shear stress at its free surface due to an external airflow: Physics of Fluids

[12/52]
Davit Y., Osborne J. M., Byrne H. M., Gavaghan D., Pitt-Francis J. M.: Validity of the Cauchy-Born rule applied to discrete cellular-scale models of biological tissues:

[12/51]
Zubkov V. S., Breward C. J. W., Gaffney E. A.: Meniscal tear film fluid dynamics near Marx’s line:

[12/50]
Bueno-Orovio A., Kay D., Burrage K.: Fourier spectral methods for fractional-in-space reaction-diffusion equations:

[12/49]
Majumdar A.: The mathematics of liquid crystals  analysis, computation and applications:

[12/48]
Séguis J. - C., Burrage K., Erban R., Kay D.: Simulation of cell movement through evolving environment: a fictitious domain approach:

[12/47]
Farmer C. L.: An ensemble Bayesian filter for state estimation:

[12/46]
Webber M. A., Bressloff P. C.: The effects of noise on binocular rivalry waves: a stochastic neural field model:

[12/45]
Bressloff P. C., Newby J. M.: Stochastic models of intracellular transport:

[12/44]
Wagner T. J. W., Vella D.: The ‘Sticky Elastica’: Delamination blisters beyond small deformations:Soft Matter

[12/43]
Paterson C., Wilson S. K., Duffy B. R.: Gravity-driven draining of a thin rivulet with constant width down a slowly varying substrate:

[12/42]
Knox D. J., Wilson S. K., Duffy B. R., McKee S.: Squeeze-film flow in the presence of a thin porous bed, with application to the human knee joint: (OCCAM Technical Report)

[12/41]
Piret C.: The orthogonal gradients method: a radial basis functions method for solving partial differential equations on arbitrary surfaces: Journal of Computational Physics

[12/40]
Fowkes J. M., Gould N. I. M., Farmer C. L.: A branch and bound algorithm for the global optimization of Hessian Lipschitz continuous functions:

[12/39]
Taroni M., Breward C. J. W., Howell P. D., Oliver J. M.: Boundary conditions for free surface inlet and outlet problems: Journal of Fluid Mechanics

[12/38]
Bressloff P. C., Lai Y. M.: Dispersal and noise: various modes of synchrony in ecological oscillators:

[12/37]
Sprittles J. E., Shikhmurzaev Y. D.: The dynamics of liquid drops and their interaction with solids of varying wettabilities: Physics of Fluids

[12/36]
Sprittles J. E., Shikhmurzaev Y. D.: Finite element simulation of dynamic wetting flows as an interface formation process: Journal of Computational Physics

[12/35]
Peppin S. S. L., Style R. S.: The physics of frost heave and ice-lens growth:

[12/34]
Wagner T. J. W., Vella D.: The sensitivity of Graphene ‘Snap-through’ to substrate geometry: Applied Physics Letters

[12/33]
Abdulle A., Vilmart G., Zygalakis K. C.: Second weak order explicit stabilized methods for stiff stochastic differential equations:

[12/32]
Moore M. R., Howison S. D., Ockendon J. R., Oliver J. M.: Three-dimensional oblique water-entry problems at small deadrise angles: Journal of Fluid Mechanics

[12/31]
Chirat R., Moulton D. E., Goriely A.: Mechanical basis of morphogenesis and convergent evolution of spiny seashells: PNAS

[12/30]
Mirams G. R., Fletcher A. G., Maini P. K., Byrne H. M.: A theoretical investigation of the effect of proliferation and adhesion on monoclonal conversion in the colonic crypt: Journal of Theoretical Biology

[12/29]
Kershaw S. K., Byrne H. M., Gavaghan D. J., Osborne J. M.: Colorectal cancer through simulation and experiment:

[12/28]
Aragón J. L., Barrio R. A., Woolley T. E., Baker R. E., Maini P. K.: Non-linear effects on Turing patterns: time oscillations and chaos:

[12/27]
O'Dea R. D., Osborne J. M., El Haj A. J., Byrne H. M., Waters S. L.: The interplay between tissue growth and scaffold degradation in engineered tissue constructs:

[12/26]
Collins-Hooper H., Woolley T. E.,  Dyson L., Patel A., Potter P., Baker R. E., Gaffney E. A., Maini P. K., Dash P. R., Patel K.: Age related changes in speed and mechanism of adult skeletal muscle stem cell migration: Stem Cells

[12/25]
Reis T., Wilson H. J.: Rolie-Poly fluid flowing through constrictions: Two distinct instabilities: Journal of Non-Newtonian Fluid Mechanics

[12/24]
Davit Y., Wood B. D., Debenest G., Quintard M.: Correspondence between one- and two-equation models for solute transport in two-region heterogeneous porous media: Transport in Porous Media

[12/23]
Reis T., Dellar P. J.: Lattice Boltzmann simulations of pressure-driven flows in microchannels using Navier–Maxwell slip boundary conditions: Physics of Fluids

[12/22]
Hale N., Trefethen L. N.: Chebfun and numerical quadrature:

[12/21]
Hubbard M. E., Byrne H. M.: Multiphase modelling of vascular tumour growth in two spatial dimensions:

[12/20]
Taroni M., Vella D.: Multiple equilibria in a simple elastocapillary system: Journal of Fluid Mechanics

[12/19]
März T., Macdonald C.: Calculus on surfaces with general closest point functions: SIAM Journal on Numerical Analysis

[12/18]
Moore M. R., Howison S. D., Ockendon J. R., Oliver J. M.: A note on oblique water entry: Journal of Engineering Mathematics

[12/17]
Yavari A., Goriely A.: Weyl geometry and the nonlinear mechanics of distributed point defects:

[12/16]
Cotter S. L., Robers G. O., Stuart A. M., White D.: MCMC methods for functions: modifying old algorithms to make them faster:

[12/15]
Lewis M. A., Li B.: Spreading speed, travelling waves, and minimal domain size in impulsive reaction-diffusion models:

[12/14]
Potapov A., Merrill E., Lewis M. A.: Wildlife disease elimination and density dependence:

[12/13]
Title and authors withheld until publication

[12/12]
Wheeler J. D., Bampfylde C. J., Lewis M. A.: Modelling temperature-dependent larval development and subsequent demographic allee effects in adult populations of the alpine butterfly Parnassius smintheus:

[12/11]
Krkošek M., Ashander J., Lewis M. A.: Parasite spill-back from domestic hosts may induce an Allee effect in wildlife hosts:

[12/10]
Krkošek M., Connors B. M., Lewis M. A., Poulin R.: Allee effects may slow the spread of parasites in a coastal marine ecosystem:

[12/09]
Jain H. V., Moldovan N. I., Byrne H. M.: Modeling stem/progenitor cell-induced neovascularization and oxygenation around solid implants

[12/08]
Jain H. V., Byrne H. M.: Qualitative analysis of an integro-differential equation model of periodic chemotherapy:

[12/07]
Griffiths I. M., Stone H. A.: Axial dispersion via shear-enhanced diffusion in colloidal suspensions: EPL

[12/06]
Woolley T. E., Baker  R. E., Gaffney E. A., Maini P. K., Seirin-Lee S.: Effects of intrinsic stochasticity on delayed reaction-diffusion patterning systems: Physical Review E

[12/05]
Davit Y., Byrne H., Osborne J., Pitt-Francis J., Gavaghan D., Quintard M.: Solute transport within porous biofilms: diffusion or dispersion?:

[12/04]
Iyer G., Zygalakis K. C.: Numerical studies of homogenization under a fast cellular flow:

[12/03]
Prior C. B., Goriely A.: The Fourier transform of tubular densities: Journal of Physics A-Mathematical and Theoretical

[12/02]
McKenzie H. W., Merrill E. H., Spiteri R. J., Lewis M. A.: How linear features alter predator movement and the functional response: Journal of the Royal Society Interface Focus

[12/01]
Moulton D. E., Goriely A., Chirat R.: Mechanical growth and morphogenesis of seashells: Journal of Theoretical Biology


2011 Preprints and publications

Top of page

[11/74]
Yavari A., Goriely A.: Riemann-Cartan geometry of nonlinear disclination mechanics:

[11/73]
Bressloff P. C., Newby J. M.: Filling of a Poisson trap by a population of random intermittent searchers:  

[11/72]
Henao D., Majumdar A.: Symmetry of uniaxial global Landau-de Gennes minimizers in the theory of nematic liquid crystals:

[11/71]
Kimpton L. S., Whiteley J. P., Waters S. L., King J. R., Oliver J. M.: Multiple travelling-wave solutions in a minimal model for cell motility : Mathematical Medicine and Biology

[11/70]
Cooray H., Cicuta P., Vella D.: The capillary interaction between two vertical cylinders: Journal of Physics: Condensed Matter

[11/69]
Giomi L., Bowick M. J., Ma X., Majumdar A.: Molecular tilt on monolayer-protected nanoparticles: A Letters Journal Exploring the Frontiers of Physics

[11/68]
Davit Y., Quintard M.: Comment on “Frequency-dependent dispersion in porous media”: Physical Review E

[11/67]
Please C. P., Fulford G. R., McElwain D. L. S., Collins M. J.: Tear film thickness variations and the role of the tear meniscus:

[11/66]
Prior C., Berger M. A.: On the shape of force-free field lines in the solar corona: Solar Physics

[11/65]
Cotter S. L., Vejchodský T., Erban  R.: Adaptive finite element method assisted by stochastic simulation of chemical systems:

[11/64]
Majumdar A., Prior C., Goriely A.: Stability estimates for a twisted rod under terminal loads a three-dimensional study: Journal of Elasticity

[11/63]
Bressloff P. C., Webber M.: Front propagation in stochastic neural fields:

[11/62]
Bressloff P. C., Webber M.: Neural field model of binocular rivalry waves: Journal of Computational Neuroscience

[11/61]
Richardson G., Please C. P., Kirkpatrick J.: Asymptotic solution of a model for bilayer organic diodes and solar cells:

[11/60]
Cotter C. J., Cotter S. L., Vialard F. X.: Bayesian data assimilation in shape registration:

[11/59]
Goriely A., Neukirch S., Hausrath A.: Helices through 3 or 4 points?:

[11/58]
Yavari A., Goriely A.: Riemann-Cartan Geometry of nonlinear dislocation mechanics:

[11/57]
Newby, J. M.: Isolating intrinsic noise sources in a stochastic genetic switch:

[11/56]
Auer S., Macdonald C. B., Treib M., Schneider J., Westermann R.: Real-time fluid effects on surfaces using the Closest Point Method: Computer Graphics Forum

[11/55]
Luo C., Majumdar A., Erban R.: The dynamics of bistable liquid crystal wells: Journal of Computational Physics

[11/54]
Hennessy M. G., Münch A.: A multiple scales approach to evaporation induced Marangoni convection:

[11/53]
Moulton D. E., Goriely A.: Surface growth kinematics via local curve evolution: Journal of Mathematical Biology

[11/52]
März T.: Image inpainting based on coherence transport with adapted distance functions: SIAM Journal on Imaging Sciences

[11/51]
Du Q., Gunzburger M., Lehoucq R. B., Zhou K.: A nonlocal vector calculus, nonlocal volume-constrained problems, and nonlocal balance laws:

[11/50]
Flegg J. A., Byrne H. M., Flegg M. B., McElwain D. L. S.: Wound healing angiogenesis: the clinical implications of a simple mathematical model: Journal of Theoretical Biology

[11/49]
Style R., Peppin S. S. L.: The kinetics of ice-lens growth in porous media: Journal of Fluid Mechanics

[11/48]
Abdulle A., Cohen D., Vilmart G., Zygalakis K. C.: High order weak methods for stochastic differential equations based on modified equations:

[11/47]
Lai Y. M., Newby J., Bressloff P. C.: Effects of demographic noise on the synchronization of a metapopulation in a fluctuating environment: Physical Review Letters

[11/46]
Murphy K. E., Hall C. L., Maini P. K., McCue S. W., McElwain D. L. S.: A two-compartment mechanochemical model of the roles of transforming growth factor β and tissue tension in dermal wound healing: Journal of Theoretical Biology

[11/45]
Murphy K. E., Hall C. L., Maini P. K., McCue S. W., McElwain D. L. S.: A fibrocontractive mechanochemical model of dermal wound closure incorporating realistic growth factor kinetics: Bulletin of Mathematical Biology

[11/44]
Davidovitch B., Schroll R. D., Vella D., Adda-Bedia M., Cerda E.: A prototypical model for tensional wrinkling in thin sheets: Proceeding of the National Academy of Sciences of the USA

[11/43]
Zubkov V. S., Breward C. J. W., Gaffney E. A.: Coupling fluid and solute dynamics within the ocular surface tear film a modelling study of black line osmolarity: Bulletin of Mathematical Biology

[11/42]
Burrage K., Hale N., Kay D.: An efficient implementation of an implicit FEM scheme for fractional-in-space reaction-diffusion equations:

[11/41]
Smith N. A. S., Peppin S. S. L., Ramos A. M.:  Generalized enthalpy model of a high pressure shift freezing process:

[11/40]
Székely Jr. T., Burrage K., Erban R., Zygalakis K. C.: Higher-order numerical methods for stochastic simulation of chemical reaction systems:

[11/39]
Griffiths I. M., Bain C. D., Breward C. J. W., Chapman S. J., Howell P. D., Waters S. L.: An asymptotic theory for the re-equilibration of a micellar surfactant solution: SIAM Journal of Applied Mathematics

[11/38]
Style R. W., Cocks A. C. F., Peppin S. S. L., Wettlaufer J. S.: Ice-lens formation and confinement-induced supercooling in soils and other colloidal materials: Physical Review E

[11/37]
Neukirch S., Frelat J., Goriely A., Maurinia C.: Frequency jumps in the planar vibrations of an elastic beam: Journal of Sound and Vibration

[11/36]
Zygalakis K. C., Roose T.: A simple mathematical model for investigating the effect of cluster roots on plant nutrient uptake:

[11/35]
Curtis M. P., Kirkman-Brown J. C., Connolly T. J., Gaffney E. A.: Modelling a tethered mammalian sperm cell undergoing hyperactivation: Journal of Theoretical Biology

[11/34]
Luo X., Hoteit I., Duan L., Wang W.: Review of nonlinear Kalman, ensemble and particle filtering with application to the reservoir history matching problem: Nonlinear Estimation and Applications to Industrial Systems Control (Book)

[11/33]
Duan L., Farmer C., Hoteit I., Luo X., Moroz I.: Data assimilation using bayesian filters and B-spline geological models: Institute of Physics: Conference Series

[11/32]
Vella D., Ajdari A., Vaziri A., Boudaoud A.: Wrinkling of pressurized elastic shells: Physical Review Letters

[11/31]
Vella D., Ajdari A., Vaziri A., Boudaoud A.: The indentation of pressurized elastic shells: From polymeric capsules to yeast cells: Journal of the Royal Society Interface

[11/30]
Luo C., Calderer M. C.: Numerical study of liquid crystal elastomers by a mixed finite element method: European Journal of Applied Mathematics

[11/29]
Wagner T. J. W., Vella D.: Floating carpets and the delamination of elastic sheets: Physical Review Letters

[11/28]
Loessner D., Flegg J., Byrne H., Hall C., Moroney T., Clements J., McElwain D., Hutmacher D.: Growth of confined cancer spheroids: a combined experimental and mathematical modelling approach: (OCCAM Technical Report)

[11/27]
Elliott J. A. W., Peppin S. S. L.: Particle trapping and banding in rapid colloidal solidification: Physical Review Letters

[11/26]
Burlakov V. M., Emptage N., Goriely A., Bressloff P. C.: Synaptic bistability due to nucleation and evaporation of receptor clusters: Physical Review Letters

[11/25]
Quezada de Luna M., Đuričković B., Goriely A.: Nonlinear waves in heterogeneous elastic rods via homogenization: International Journal of Nonlinear Mechanics

[11/24]
Hall C., Markenscoff X.: On approaches to modelling lattice dislocations: (OCCAM Technical Report)

[11/23]
Mihai L. A., Goriely A.: Positive or negative Poynting effect?  The role of adscititious inequalities in hyperelastic materials: Proceedings of the Royal Society

[11/22]
Menon S. N., Hall C. L., McCue S. W., McElwain D. L. S.: A novel model for one-dimensional morphoelasticity. Part II - Application to the contraction of fibroblast-populated collagen lattices: (OCCAM Technical Report)

[11/21]
Hall C. L., Menon S. N., McCue S. W., McElwain D. L. S.: A novel model for one-dimensional morphoelasticity. Part I - Theoretical foundations: (OCCAM Technical Report)

[11/20]
Franz B., Erban R.: Hybrid modelling of individual movement and collective behaviour: Dispersal, individual movement and spatial ecology: A mathematical perspective (book chapter)

[11/19]
Keener J. P., Newby J. M.: A perturbation analysis of spontaneous action potential initiation by stochastic ion channels: Physical Review E

[11/18]
Hall C. L.: Asymptotic analysis of a pile-up of edge dislocation: Materials Science and Engineering A

[11/17]
Soon Y. W., Clarke T. M., Zhang W., Agostinelli T., Kirkpatrick J., Dyer-Smith C., McCulloch I., Nelson J., Durrant J. R.: Energy versus electron transfer in organic solar cells: a comparison of the photophysics of two indenofluorene: fullerene blend films: Chemical Science

[11/16]
Kirchartz T., Pieters B. E., Kirkpatrick J., Rau U., Nelson J.: Recombination via tail states in polythiophene:fullerene solar cells: Physical Review B

[11/15]
Flegg M. B., Chapman S. J., Erban R.: The Two Regime method for optimizing stochastic reaction-diffusion simulations: Proceedings of the National Academy of Sciences

[11/14]
Cotter S. L., Zygalakis K. C., Kevrekidis I. G., Erban R.: A constrained approach to multiscale stochastic simulation of chemically reacting systems: Journal of Chemical Physics

[11/13]
Bressloff P. C., Newby J. M.: Quasi-steady state analysis of two-dimensional random intermittent search processes: Physical Review E

[11/12]
Klika V., Baker R. E., Headon D., Gaffney E. A.: The influence of receptor-mediated interactions on reaction-diffusion mechanisms of cellular self-organisation: Bulletin of Mathematical Biology

[11/11]
Braun R. J.: Dynamics of the tear film: Annual Review of Fluid Mechanics

[11/10]
Griffiths I. M., Bain C. D., Breward C. J. W., Colegate D. M., Howell P. D., Waters S. L.: On the predictions and limitations of the Becker–Doring model for reaction kinetics in micellar surfactant solutions: Journal of Colloid and Interface Science

[11/09]
McNamara H., Bower G., Dellar P. J.: A locally adaptive time-stepping algorithm for petroleum reservoir simulations:

[11/08]   
Cross R., McNamara H., Kalachev L., Pokrovskii A.: Hysteresis and Post Walrasian Economics: Discrete & Continuous Dynamical Systems Series B

[11/07]
Ketcheson D. I., Gottlieb S., Macdonald C. B.: Strong stability preserving Two-Step Runge-Kutta Methods: SIAM Journal on Numerical Analysis

[11/06]
Fornberg B., Weideman J. A. C.: A Numerical Methodology for the Painlevé Equations: Journal of Computational Physics

[11/05]
Macdonald C., Brandman J., Ruuth S. J.: Solving Eigenvalue Problems on Curved Surfaces: Journal of Computational Physics

[11/04]
Erban R., Haskovec, J.: From individual to collective behaviour of coupled velocity jump processes - a locust example:

[11/03]
Goriely A., Tabor M.: Spontaneous rotational inversion in Phycomyces: Physical Review Letters

[11/02]
Epstein M., Goriely A.: Self-diffusion in remodelling and growth: Zeitschrift für angewandte Mathematik und Physik

[11/01]
Lippok N., Nielsen P., Vanholsbeeck F.: Fluctuations and instability in sedimentation: Optics Express


2010 Preprints and publications

Top of page

[10/66]
Spannuth M.,  Mochrie S. G. J., Peppin S. S. L., Wettlaufer J. S.: Dynamics of colloidal particles in ice: Journal of Chemical Physics

[10/65]
Bruna M., Chapman S. J.: Excluded-volume effects in the diffusion of hard spheres: Physical Review E
 
[10/64]
Kirkpatrick, J.: Hot Charge Pairs and Charge Generation in Donor Acceptor Blends: (OCCAM Technical Report)

[10/63]
Zygalakis K. C., Kirk G. J. D., Jones D. L., Wissuwa M., Roose T.:  A dual porosity model of nutrient uptake by root hairs: New Phytologist

[10/62]
Oburger E., Leitner D., Jones D. L., Zygalakis K. C., Schnepf A., Roose T.:  Adsorption and desorption dynamics of citric acid anions in soil: European Journal of Soil Science

[10/61]
Bressloff P.: Metastable states and quasicycles in a stochastic Wilson-Cowan model of neuronal population dynamics: Physical Review E

[10/60]
Bressloff P., Lai Y. M.:  Stochastic synchronization of neuronal populations with intrinsic and extrinsic noise: Journal Mathematical Neuroscience
 
[10/59]
Münch A., Please C. P., Wagner B.:  Spin coating of an evaporating polymer solution: Physics of Fluids

[10/58]
Spannuth M., Mochrie S. G. J., Peppin S. S. L., Wettlaufer J. S.: Particle-scale structure in frozen colloidal suspensions from small angle X-ray scattering: Physical Review E.

[10/57]
Pathmanathan P., Bernabeu M. O., Bordas R., Cooper J., Garny A., Pitt-Francis J. M., Whiteley J. P., Gavaghan D. J.:  A numerical guide to the solution of the bidomain equations of cardiac electrophysiology: Progress in Biophysics and Molecular Biology

[10/56]
Osborne J. M., O'Dea R. D., Whiteley J. P., Byrne H. M., Waters S. L.:  The Influence of Bioreactor Geometry and the Mechanical Environment on Engineered Tissues: ASME Journal of Biomechanical Engineering

[10/55]
Destrade M., Goriely A., Saccomandi G.:  Scalar evolution equations for shear waves in incompressible solids: A simple derivation of the Z, ZK, KZK, and KP equations: Proceedings of the Royal Society A

[10/54]
Loessner D., Flegg J. A., Byrne H. M. Hall C. L., Moroney T. J., Clements J. A., Hutmacher D. W., McElwain D. L. S.: Modeling the growth of multicellular cancer spheroids in a bioengineered 3D microenvironment and their treatment with an anti-cancer drug: (OCCAM Technical Report)
 
[10/53]
Majumdar A.:  Liquid Crystal Theory and Modelling: Discussion Meeting: Liquid Crystals Today
 
[10/52]
Majumdar A.:  Order parameters in the Landau-de Gennes theory - the static and dynamic scenarios: Liquid Crystals

[10/51]
Klingbeil G., Erban R., Giles M., Maini P. K.:  STOCHSIMGPU: Parallel stochastic simulation for the Systems Biology Toolbox 2 for MATLAB: Bioinformatics
 
[10/50]
Flynn C., Rubin M. B., Nielsen P.: A model for the anisotropic response of fibrous soft tissues using six discrete fibre bundles: International Journal for Numerical Methods in Biomedical Engineering

[10/49]
Cotter S. L., Dashti M., Robinson J. C., Stuart A. M.: Variational Data Assimilation Using Targetted Random Walks: International Journal for Numerical Methods in Fluids

[10/48]
Moulton D. E., Goriely A.: Possible role of differential growth in airway wall remodeling in asthma: Journal of Applied Physiology

[10/47]
Stoll M., Wathen A.: All-at-once solution of time-dependent PDE-constrained optimization problems:

[10/46]
Bressloff P. C., Oster A. M.: A theory for the alignment of cortical feature maps during development: Physical Review E

[10/45]
Kilpatrick Z. P., Bressloff P. C.: Binocular Rivalry in a Competitive Neural Network with Synaptic Depression: SIAM Applied Dynamical Systems

[10/44]
Style R. W., Peppin S. S. L., Cocks A. C. F.: Mud peeling and horizontal crack formation in drying clays: Journal of Geophysical Research: Earth Surface

[10/43]
Chapman S. J., Lottes J., Trefethen L. N.: Four Bugs on a Rectangle: Proceedings of the Royal Society A

[10/42]
Motamed M., Macdonald C. B., Ruuth S. J.: On the Linear Stability of the Fifth-Order WENO Discretization: Journal of Scientific Computing

[10/41]
Goswami D., Pani A. K., Yadav S.: Optimal Error Estimates of a Mixed Finite Element Method for Parabolic Integro-Differential Equations with Non Smooth Initial Data:

[10/40]
McKibbin R., Hale N., Style R., Walters N.: Convection and heat transfer in layered sloping warm-water aquifers: Journal of Porous Media

[10/39]
Newby J., Bressloff P. C.: Local synaptic signaling enhances the stochastic transport of motor-driven cargo in neurons: Physical Biology

[10/38]
Stoll M., Wathen A.: Preconditioners for state constrained optimal control problems with Moreau-Yosida penalty function: Numerical Linear Algebra with Applications

[10/37]
Moulton D. E., Goriely A.: Circumferential buckling instability of a growing cylindrical tube: Journal of the Mechanics and Physics of Solids

[10/36]
Duan L., Farmer C. L., Moroz I. M.: Sequential Inverse Problems Bayesian Principles and the Logistic Map Example: 8th International Conference of Numerical Analysis and Applied Mathematics 2010

[10/35]
Duan L., Farmer C. L., Moroz I. M.: Regularized Particle Filter with Langevin Resampling Step: 8th International Conference of Numerical Analysis and Applied Mathematics 2010

[10/34]
Reis T., Dellar P.: A random projection method for sharp phase boundaries in lattice Boltzmann simulations: Proceedings of the 12th European Conference for the Mathematics of Oil Recovery

[10/33]
Whiteley J. P., Gillow K., Tavener S. J., Walter A. C.: Error bounds on block Gauss–Seidel solutions of coupled multiphysics problems: International Journal for Numerical Methods in Engineering

[10/32]
Gadêlha H., Gaffney E. A., Smith D. J., Kirkman-Brown J. C.: Nonlinear instability in flagellar dynamics: a novel modulation mechanism in sperm migration?: Journal of the Royal Society Interface

[10/31]
Majumdar A.: The Radial-Hedgehog Solution in Landau-de Gennes'  theory: European Journal of Applied Mathematics

[10/30]
Majumdar A.: The Landau-de Gennes theory of nematic liquid crystals: Uniaxiality versus Biaxiality: Communications in Pure and Applied Analysis

[10/29]
Goswami D., Pani A. K.: A Priori Error Estimates for Semidiscrete Finite Element Approximations to Equations of Motion Arising in Oldroyd Fluids of Order One: International Journal of Numerical Analysis and Modeling

[10/28]
Memon S., Nataraj N., Pani A. K.: An a posteriori error analysis of a mixed finite element Galerkin approximation to second order linear parabolic problems:

[10/27]
Benilov E. S., Chapman S. J., Mcleod J. B., Ockendon J. R., Zubkov V. S.: On Liquid Films on an Inclined Plate: Journal of Fluid Mechanics

[10/26]
Ellis A. S., Fowler A. C.: On an evolution equation for sand dunes:

[10/25]
Blank L., Sarbu L., Stoll M.: Preconditioning for Allen-Cahn Variational Inequalities with Non-Local Constraints: Journal of Computational Physics

[10/24]
Hall C. L., Band L. R., Richardson G., Jensen O. E., Siggers J. H., Foss: Intracellular Flow in Optic Nerve Axons: A Mechanism for Cell Death in Glaucoma: Conference presentation for EUROMECH 2010

[10/23]
Hall C. L., Chapman S. J., Ockendon J. R.: Asymptotic analysis of a system of algebraic equations arising in dislocation theory: SIAM Journal of Applied Mathematics

[10/22]
Klingbeil G., Erban R., Giles M., Maini P. K.: Fat vs. thin threading approach on GPUs application to stochastic simulation of chemical reactions: IEEE Transactions on Parallel & Distributed Systems

[10/21]
Pathmanathan P., Chapman S. J., Gavaghan D. J., Whiteley J. P.: Cardiac Electromechanics The Effect of Contraction Model on the Mathematical Problem and Accuracy of the Numerical Scheme: Quaterly Journal of Mechanics and Applied Mathematics

[10/20]
Hall C. L.: Asymptotic expressions for the nearest and furthest dislocations in a pile-up against a grain boundary: The Philosophical Magazine

[10/19]
Goriely A., Moulton D. E., Vandiver R.: Elastic cavitation, tube hollowing, and differential growth in plants and biological tissues: EuroPhysics Letters

[10/18]
Robertson-Tessi, M., El-Kareh A., Goriely A.: A Mathematical Model of Tumor-Immune Interactions: Journal of Theoretical Biology

[10/17]
Style R. W., Peppin S. S. L.: Crust formation in drying colloidal suspensions: Proceedings of the Royal Society A

[10/16]
Goriely A., Moulton D. E.: The Physics and Mechanics of Biological Systems: Lecture Notes of the Les Houches Summer Schools (Book Chapter)

[10/15]
Xue C., Hwang H. J., Painter K. J., Erban R.: Travelling waves in hyperbolic chemotaxis equations: Bulletin of Mathematical Biology

[10/14]
Lipkovà J., Zygalakis K. C., Chapman, S. J., Erban R.: Analysis of Brownian Dynamics Simulations of Reversible Bimolecular Reactions: SIAM Journal on Applied Mathematics

[10/13]
McMahon J., Goriely A., Tabor M.: Nonlinear Morphoelastic Plates II: Exodus to Buckled States: Mathematics and Mechanics of Solids

[10/12]
McMahon J., Goriely A., Tabor M.: Nonlinear Morphoelastic Plates I: Genesis of Residual Stress: Mathematics and Mechanics of Solids

[10/11]
De Pascalis R., Destrade M., Goriely A.: Nonlinear Correction to the Euler Buckling Formula for Compressible Cylinders: Journal of Elasticity

[10/10]
Goriely A., Vandiver R.: On the mechanical stability of growing arteries: IMA journal of Applied Mathematics

[10/09]
Goriely A., Moulton D. E.: Anticavitation and differential growth in elastic shells: Journal of Elasticity

[10/08]
Reis T., Dellar P. J.: A volume-preserving sharpening approach for the propagation of sharp phase boundaries in multiphase lattice Boltzmann simulations: Computers and Fluids

[10/07]
Majumdar A., Peppin S. S. L., Style R., Sander G.: Frost Heave In Compressible Soils: SIAM Journal on Applied Mathematics

[10/06]
Zygalakis K. C., Roose T.: Derivation of a dual porosity model for the uptake of nutrients by root hairs: (OCCAM Technical Report)

[10/05]
Escudero C., Yates C. A., Buhl J., Couzin I. D., Erban R., Kevrekidis I. G., Maini P. K.: Ergodic directional switching in mobile insect groups: Physical Review E

[10/04]
Newby J., Bressloff P. C.: Random intermittent search and the tug-of-war model of motor-driven transport: Journal of Statistical Mechanics

[10/03]
Kilpatrick Z. P., Bressloff P. C.: Stability of bumps in piecewise smooth neural fields with nonlinear adaptation: Physica D

[10/02]
Hinch E. J.: Determining the equation of state of highly plasticised metals from boundary velocimetry Part II. An inverse problem or not: Journal of Engineering Mathematics

[10/01]
Guazzelli É. and Hinch E. J.: Fluctuations and instability in sedimentation: Annual Reviews of Fluid Mechanics


2009 Preprints and publications

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[09/50]
Gaffney E. A., Gadelha H., Smith D. J., Blake J. R., Kirkman-Brown J. C.: Mammalian Sperm Motility: Observation and Theory: Annual Reviews of Fluid Mechanics

[09/49]
Boston E. A. J., Gaffney E. A.: Incorporating The Influence of Toxicity Constraints in Models of Chemotherapeutic Scheduling: Mathematical Medicine and Biology
 
[09/48]
Cominetti O., Matzavinos A., Samarasinghe S., Kulasiri D., Liu S., Maini P. K., Erban R.:  DifFUZZY: A fuzzy spectral clustering algorithm for complex data sets: International Journal of Computational Intelligence in Bioinformatics and Systems Biology
 
[09/47]
Ppotsepaev R. V., Farmer C. L., Aziz M.:  Stochastic Partial Differential Equations as priors in ensemble methods for solving inverse problems: (OCCAM Technical Report)
 
[09/46]
Yates C. A., Baker R. E., Erban R., Maini P. K.: Refining self-propelled particle models for collective behaviour: Canadian Applied Mathematics Quarterly 

[09/45]
Wright G. B., Flyer N.: A Hybrid Radial Basis Function - Pseudospectral Method for Thermal Convection in a 3-D Spherical Shell :Geophysics, Geochemistry, Geosystems

[09/44]
Finka M., Niederer S. A., Cherry E. M., Fenton F. H., Koivumki J. T., Seemann G., Thul R., Zhang H., Sachse F. B., Beard D., Crampin E. J., Smith N. P.:  Cardiac cell modelling: Observations from the heart of the cardiac physiome project:Progress in Biophysics and Molecular Biology

[09/43]
Lazic S. E.:  Pseudoreplication invalidates the results of many neuroscientific studies:BMC Neuroscience
 
[09/42]
Melykuti B., Burrage K., Zygalakis K. C.:  Fast stochastic simulation of biochemical reaction systems by alternative formulations of the Chemical Langevin Equation: Journal of Chemical Physics
 
[09/41]
Haynes P. H., Hoang V. H., Norris J. R., Zygalakis K. C.:  Homogenization for advection-diffusion in a perforated domain: Probability and Mathematical Genetics: Papers in Honour of Sir John Kingman, LMS Lecture Notes Series (Book)
 
[09/40]
Kilpatrick Z. P., Bressloff P. C.:  Stationary bumps in a piecewise smooth neural field model with synaptic depression:SIAM Journal of Applied Math
 
[09/39]
Kilpatrick Z. P., Bressloff P. C.:    Spatially structured oscillations in a two-dimensional excitatory neuronal network with synaptic depression: Journal of Computational Neuroscience
 
[09/38]
Goswami D., Pani A. K., Yadav S.:  Optimal L2 estimates for semidiscrete Galerkin methods for parabolic integro-differential equations with nonsmooth data
 
[09/37]
Goswami D., Pani A. K.:  Optimal L2-error estimates for the semidiscrete Galerkin approximation to a second order linear parabolic initial and boundary value problem with nonsmooth initial data: Numerical  Functional Analysis and Optimizations

[09/36]
Shum H., Gaffney E. A., Smith D. J.: Modelling bacterial behaviour close to a no-slip plane boundary: the influence of bacterial geometry: Proceedings of the Royal Society A  
 
[09/35]
Tran K., Smith N., Loiselle D., Crampin E.:  A metabolite-sensitive, thermodynamically-constrained model of cardiac cross-bridge cycling: Implications for force development during ischemia: Biophysical Journal

[09/34]
Majumdar A., Robbins J. M., Zyskin M.:  Tangent unit-vector fields: nonabelian homotopy invariants and the Dirichlet energy: Acta Mathematica Scientia

[09/33]
Ball J. M., Majumdar A.:  Nematic liquid crystals : from Maier-Saupe to a continuum theory: Proceedings of ECLC 2009, Molecular Crystals and Liquid Crystals

[09/32]
Benner P., Faßbender H., Stoll M.:   A Hamiltonian Krylov-Schur-type method based on the symplectic Lanczos process: Linear Algebra & its Applications
 
[09/31]
Bressloff P. C.:  Stochastic neural field theory and the system-size expansion: SIAM Journal of Applied Mathematics

[09/30]
Pani A. K., Yadav S.: An hp-Local Discontinuous Galerkin method for Parabolic Integro-Differential Equations: Journal of Scientific Computing

[09/29]
Rees T., Stoll M., Wathen A.: All-at-once preconditioning in PDE-constrained optimization: Kybernetika

[09/28]
Newby J. M., Bressloff P. C.: Quasi-steady state reduction of molecular motor-based models of directed intermittent search: Bulletin of Mathematical Biology

[09/27]
Derfel G., van Brunt B., Wake G. C.: A Cell Growth Model Revisited
 
[09/26]
Wake G. C., Begg R. E.: Functional differential equations arising in cell-growth: MATEMATIKA

[09/25]
Stoll M., Wathen A.: Preconditioning for active set and projected gradient methods as semi-smooth Newton methods for PDE-constrained optimization with control constraints: Numerical Linear Algebra with Applications

[09/24]
Aydemir E., Breward C. J. W., Witelski T. P.: The effect of polar lipids on tear film dynamics: Bulletin of Mathematical Biology

[09/23]
Peppin S. S. L., Majumdar A., Wettlaufer J. S.: Morphological instability of a nonequilibrium icecolloid interface: Proceedings of The Royal Society A
 
[09/22]
Majumdar A., Robbins J. M., Zyskin M.: Tangent unit-vector fields: nonabelian homotopy invariants and the Dirichlet energy:  Comptes Rendus Mathematique

[09/21]
Fornberg B.: A finite difference method for free boundary problems:  Journal of Computational and Applied Mathematics

[09/20]
Charpin J. P. F., Kobo N. S., Legodi K., Makinde O. D., Ngnotchouye J. M. T., Ockendon H., Owinoh A. Z., Peppin S. S. L., Whiteley J.: Pebble bed: reflector treatment and pressure velocity coupling 

[09/19]
Zygalakis K. C.: On the existence and the applications of modified equations for stochastic differential equations: SIAM Journal of Scientific Computing

[09/18]
Erban R., Chapman S. J., Kevrekidis I. G., Vejchodsky T.: Analysis of a Stochastic Chemical System Close to a Sniper Bifurcation of its Mean Field Model: SIAM Journal of Applied Mathematics

[09/17]
Lee S. S., Gaffney E. A., Monk N. A. M.: The Influence of Gene Expression Time Delays on Gierer-Meinhardt Pattern Formation Systems: Bulletin of Mathematical Biology
 
[09/16]
Baker R. E., Yates C. A., Erban R.: From microscopic to macroscopic descriptions of cell migration on growing domains: Bulletin of Mathematical Biology
 
[09/15]
Rees T., Stoll M.: Block triangular preconditioners for PDE constrained optimization: Numerical Linear Algebra with Applications

[09/14]
Pitt-Francis J., Pathmanathan P., Bernabeu M. O., Bordas R., Cooper J., Fletcher A., Mirams G. R., Murray P., Osborne J., Walter A., Chapman S. J., Garny A., van Leeuwen I. M. M., Maini P. K., Rodriguez B., Whiteley J. P., Byrne H. M., Gavaghan D. J.: Chaste: a test-driven approach to software development for physiological modelling: Computational Physics Communication

[09/13]
Erban R., Chapman S. J: Stochastic modelling of reaction-diffusion processes: algorithms for bimolecular reactions: Physical Biology

[09/12]
Xue C., Othmer H. G., Erban R.: From Individual to Collective Behavior of Unicellular Organisms: Recent Results and Open Problems: Proceedings of the 2nd Okinawa Conference on Mathematics and Biology:Multi-Scale Phenomena in Biology Workshop

[09/11]
Pathmanathan P., Gavaghan D. J., Whiteley J. P.: A Comparison of Numerical Methods used for Finite Element Modelling of Soft Tissue Deformation: Journal of Strain Analysis

[09/10]
Majumdar A., Zarnescu A.: Landau-De Gennes theory of nematic liquid crystals: the Oseen-Frank limit and beyond: Archive of Rational Mechanics and Analysis

[09/09]
Majumdar A.: Equilibrium order parameters of nematic liquid crystals in the Landau-De Gennes theory: European Journal of Applied Mathematics

[09/08]
Whiteley J. P.: Model reduction using a posteriori analysis: Mathematical Biosciences
 
[09/07]
Southern J. A., Plank G., Vigmond E. J., Whiteley J. P.: Solving the Coupled System Improves Computational Efficiency of the Bidomain Equations: IEEE Transactions on Biomedical Engineering

[09/06]
Yates C. A., Erban R., Escudero C., Couzin I. D., Buhl J., Kevrekidis I. G., Maini P. K., Sumpter D. J. T.: Inherent noise can facilitate coherence in collective swarm motion: PNAS (Proceedings of the National Academy of Sciences of the United States of America)

[09/05]
Peppin S. S. L., Spannuth M. J., Wettlaufer J. S.: Onsager reciprocity in premelting solids: Journal of Statistical Physics

[09/04]
Madzvamuse A., Gaffney E. A., Maini P. K.: Stability analysis of reaction-diffusion systems with time-dependent coefficients on growing domains: Bulletin of Mathematical Biology
 
[09/03]
Moreo P., Gaffney E. A., García-Aznar J. M., Doblaré M.: On the modelling of biological patterns with mechanochemical models: insights from analysis and computation: Bulletin of Mathematical Biology

[09/02]
Peppin S. S. L.: Diffusion and permeation in binary solutions: Application to protein ultrafiltration: Journal of Non-Equilibrium Thermodynamics

[09/01]
Gaffney E. A., Tiffany J. M., Yokoi N., Bron A. J.: A Mass and Solute Balance Model for Tear Volume and Osmolarity in The Normal And The Dry Eye: Progress in Retinal and Eye Research

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