Date
Mon, 03 Mar 2008
13:15
Location
Oxford-Man Institute
Speaker
Dr Christina Goldschmidt
Organisation
Department of Statistics, Oxford

I will take as my starting point a problem which is classical in

population genetics: we wish to understand the distribution of numbers

of individuals in a population who carry different alleles of a

certain gene. We imagine a sample of size n from a population in

which individuals are subject to neutral mutation at a certain

constant rate. Every mutation gives rise to a completely new type.

The genealogy of the sample is modelled by a coalescent process and we

imagine the mutations as a Poisson process of marks along the

coalescent tree. The allelic partition is obtained by tracing back to

the most recent mutation for each individual and grouping together

individuals whose most recent mutations are the same. The number of

blocks of each of the different possible sizes in this partition is

called the allele frequency spectrum. Recently, there has been much

interest in this problem when the underlying coalescent process is a

so-called Lambda-coalescent (even when this is not a biologically

``reasonable'' model) because the allelic partition is a nice example

of an exchangeable random partition. In this talk, I will describe

the asymptotics (as n tends to infinity) of the allele frequency

spectrum when the coalescent process is a particular Lambda-coalescent

which was introduced by Bolthausen and Sznitman. It turns out that

the frequency spectrum scales in a rather unusual way, and that we

need somewhat unusual tools in order to tackle it.

This is joint work with Anne-Laure Basdevant (Toulouse III).

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