Generative Models on the Space of Diffeomorphisms: A Deformation-Centric Framework for Multi-Organ Anatomy
Abstract
Jian-Qing Zheng will talk about: 'Generative Models on the Space of Diffeomorphisms: A Deformation-Centric Framework for Multi-Organ Anatomy'
Generative models for images are typically formulated in pixel space, where the geometric structure of the underlying objects is not directly represented. For anatomical data, a more natural representation is provided by the deformation that maps one anatomical configuration to another, rather than by the intensities themselves. The set of such deformations forms a structured, non-Euclidean space, and working in this space changes how registration, generation, and representation learning can be approached. In this talk, a framework will be presented in which deformations, rather than images, are treated as the primary modeling object. Image registration is recast as the problem of recovering a deformation between two anatomies, and is extended to the multi-organ setting by modeling deformations of several organs jointly with their geometric couplings. A diffusion-based generative model is then introduced that operates directly on deformations, so that each generated sample is, by construction, an interpretable transformation of a real anatomy. The framework is extended into a foundation model trained across multiple modalities and anatomical regions, and is evaluated on medical imaging tasks including few-shot segmentation, registration, and phenotype-conditioned anatomical prediction.
Bio:
Jian-Qing Zheng is a Postdoctoral Researcher at the University of Oxford (2024–present), specialising in artificial intelligence for biomedicine. He obtained his DPhil from Oxford as a Kennedy Trust Scholar. His research develops machine learning frameworks for biomedical and immunological applications, with a focus on robust modelling and real-world impact. He serves on the editorial boards of PLOS Digital Health and MedScience (Springer). He has published over 20 papers in leading venues, including Medical Image Analysis, Cell Research, and IEEE Trans on Signal Proc.