Generation time of the alpha and delta SARS-CoV-2 variants: an epidemiological analysis
      
        Hart, W
        Miller, E
        Andrews, N
        Waight, P
        Maini, P
        Funk, S
        Thompson, R
        
                    (04 May 2022)
        
The impact of cross-reactive immunity on the emergence of SARS-CoV-2 variants
      
        Thompson, R
        Southall, E
        Daon, Y
        Lovell-Read, F
        Iwami, S
        Thompson, C
        Obolski, U
        
                    (01 Jan 2022)
        
Estimation of heterogeneous instantaneous reproduction numbers with application to characterize SARS-CoV-2 transmission in Massachusetts counties
      
        Zhou, Z
        Kolaczyk, E
        Thompson, R
        White, L
        
                    
Using ‘sentinel’ plants to improve early detection of invasive plant pathogens
      
        Lovell-Read, F
        Parnell, S
        Cunniffe, N
        Thompson, R
        
                    
A quantitative model used to compare within-host SARS-CoV-2, MERS-CoV, and SARS-CoV dynamics provides insights into the pathogenesis and treatment of SARS-CoV-2
      
        Kim, K
        Ejima, K
        Iwanami, S
        Fujita, Y
        Ohashi, H
        Koizumi, Y
        Asai, Y
        Nakaoka, S
        Watashi, K
        Aihara, K
        Thompson, R
        Ke, R
        Perelson, A
        Iwami, S
        PLoS Biology
        volume 19
            issue 3
                (22 Mar 2021)
        
Detection of significant antiviral drug effects on COVID-19 with reasonable sample sizes in randomized controlled trials: a modeling study
      
        Iwanami, S
        Ejima, K
        Kim, K
        Noshita, K
        Fujita, Y
        Miyazaki, T
        Kohno, S
        Miyazaki, Y
        Morimoto, S
        Nakaoka, S
        Koizumi, Y
        Asai, Y
        Aihara, K
        Watashi, K
        Thompson, R
        Shibuya, K
        Fujiu, K
        Perelson, A
        Iwami, S
        Wakita, T
        PLoS Medicine
        volume 18
            issue 7
                (06 Jul 2021)
        
Vaccine escape in a heterogeneous population: insights for SARS-CoV-2 from a simple model
      
        Gog, J
        Hill, E
        Danon, L
        Thompson, R
        Royal Society Open Science
        volume 8
            issue 7
                (14 Jul 2021)
        
Quantifying pupil-to-pupil SARS-CoV-2 transmission and the impact of lateral flow testing in English secondary schools
      
        Leng, T
        Hill, E
        Holmes, A
        Southall, E
        Thompson, R
        Tildesley, M
        Keeling, M
        Dyson, L
        Nature Communications
        volume 13
                    (01 Mar 2022)
        
The effect of notification window length on the epidemiological impact of COVID-19 contact tracing mobile applications
      
        Leng, T
        Hill, E
        Keeling, M
        Tildesley, M
        Thompson, R
        Communications Medicine
        volume 2
            issue 1
                (27 Jun 2022)
        
Assessing the impact of lateral flow testing strategies on within-school SARS-CoV-2 transmission and absences: a modelling study.
      
        Leng, T
        Hill, E
        Thompson, R
        Tildesley, M
        Keeling, M
        Dyson, L
        PLoS Computational Biology
        volume 18
            issue 5
                (27 May 2022)