Risk Factors for Severe Outcomes following 2009 Influenza A (H1N1) Infection: A Global Pooled Analysis
 Van Kerkhove, M Vandemaele, K Shinde, V Jaramillo-Gutierrez, G Koukounari, A Donnelly, C Carlino, L Owen, R Paterson, B Pelletier, L Vachon, J Gonzalez, C Hongjie, Y Zijian, F Chuang, S Au, A Buda, S Krause, G Haas, W Bonmarin, I Taniguichi, K Nakajima, K Shobayashi, T Takayama, Y Sunagawa, T Heraud, J Orelle, A Palacios, E van der Sande, M Wielders, C Hunt, D Cutter, J Lee, V Thomas, J Santa-Olalla, P Sierra-Moros, M Hanshaoworakul, W Ungchusak, K Pebody, R Jain, S Mounts, A PLOS Medicine volume 8 issue 7 e1001053 (05 Jul 2011)
Principles of Applied Statistics Cox, D Donnelly, C (28 Jul 2011)
A Statistical Model of the International Spread of Wild Poliovirus in Africa Used to Predict and Prevent Outbreaks
 O'Reilly, K Chauvin, C Aylward, R Maher, C Okiror, S Wolff, C Nshmirimana, D Donnelly, C Grassly, N PLOS Medicine volume 8 issue 10 e1001109 (18 Oct 2011)
Integrated monitoring and evaluation and environmental risk factors for urogenital schistosomiasis and active trachoma in Burkina Faso before preventative chemotherapy using sentinel sites
 Koukounari, A Touré, S Donnelly, C Ouedraogo, A Yoda, B Ky, C Kaboré, M Bosqué-Oliva, E Basáñez, M Fenwick, A Webster, J BMC Infectious Diseases volume 11 issue 1 191 (12 Dec 2011)
Localized reactive badger culling increases risk of bovine tuberculosis in nearby cattle herds
 Vial, F Donnelly, C Biology Letters volume 8 issue 1 50-53 (23 Feb 2012)
Real-time Estimates in Early Detection of SARS - Volume 12, Number 1—January 2006 - Emerging Infectious Diseases journal - CDC
 Cauchemez, S Boëlle, P Donnelly, C Ferguson, N Thomas, G Leung, G Hedley, A Anderson, R Valleron, A Emerging Infectious Diseases volume 12 issue 1 110-113 (Jan 2006)
Recurrence of bovine tuberculosis breakdowns in Great Britain: Risk factors and prediction
 Karolemeas, K McKinley, T Clifton-Hadley, R Goodchild, A Mitchell, A Johnston, W Conlan, A Donnelly, C Wood, J Preventive Veterinary Medicine volume 102 issue 1 22-29 (20 Oct 2011)
Genetic diversity of Schistosoma japonicum miracidia from individual rodent hosts
 Lu, D Wang, T Rudge, J Donnelly, C Fang, G Webster, J International Journal for Parasitology volume 41 issue 13-14 1371-1376 (29 Nov 2011)
Risk of contact between endangered African wild dogs Lycaon pictus and domestic dogs: opportunities for pathogen transmission
 Woodroffe, R Donnelly, C Journal of Applied Ecology volume 48 issue 6 1345-1354 (05 Dec 2011)
Transmission Dynamics, Border Entry Screening, and School Holidays during the 2009 Influenza A (H1N1) Pandemic, China - Volume 18, Number 5—May 2012 - Emerging Infectious Diseases journal - CDC
 Yu, H Cauchemez, S Donnelly, C Zhou, L Feng, L Xiang, N Zheng, J Ye, M Huai, Y Liao, Q Peng, Z Feng, Y Jiang, H Yang, W Wang, Y Ferguson, N Feng, Z Emerging Infectious Diseases volume 18 issue 5 758-766 (May 2012)
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