Wed, 19 Nov 2014
12:30
N3.12

Modularity of networks

Fiona Skerman
(Oxford University)
Abstract

Modularity is a quality function on partitions of a network which aims to identify highly clustered components. Given a graph G, the modularity of a partition of the vertex set measures the extent to which edge density is higher within parts than between parts; and the modularity q(G) of G is the maximum modularity of a partition of V(G). Knowledge of the maximum modularity of the corresponding random graph is important to determine the statistical significance of a partition in a real network. We provide bounds for the modularity of random regular graphs. Modularity is related to the Hamiltonian of the Potts model from statistical physics. This leads to interest in the modularity of lattices, which we will discuss. This is joint work with Colin McDiarmid.

Wed, 12 Nov 2014
12:30
N3.12

The boundary of the curve complex: a journey by train

Antonio De Capua
(Oxford University)
Abstract

The curve graph of a surface has a vertex for each curve on the surface and an edge for each pair of disjoint curves. Although it deals with very simple objects, it has connections with questions in low-dimensional topology, and some properties that encourage people to study it. Yet it is more complicated than it may look from its definition: in particular, what happens if we start following a 'diverging' path along this graph? It turns out that the curves we hit get so complicated that eventually give rise to a lamination filling up the surface. This can be understood by drawing some train track-like pictures on the surface. During the talk I will keep away from any issue that I considered too technical.

Wed, 05 Nov 2014
12:30
N3.12

Cluster algebras of finite type

Teresa Conde
(Oxford University)
Abstract

Cluster algebras are commutative algebras generated by a set S, obtained by an iterated mutation process of an initial seed. They were introduced by S. Fomin and A. Zelevinski in connection with canonical bases in Lie theory. Since then, many connections between cluster algebras and other areas have arisen.
This talk will focus on cluster algebras for which the set S is finite. These are called cluster algebras of finite type and are classified by Dynkin diagrams, in a similar way to many other objects.

 
Wed, 29 Oct 2014
12:30
N3.12

Folding free-group automorphisms

Giles Gardam
(Oxford University)
Abstract

Stallings' folding technique lets us factor a map of graphs as a sequence of "folds" (edge identifications) followed by an immersion. We will show how this technique gives an algorithm to express a free-group automorphism as the product of Whitehead automorphisms (and hence Nielsen transformations), as well as proving finite generation for some subgroups of the automorphism group of a free group.

 
Tue, 28 Oct 2014

14:30 - 15:00
L5

Sparse Compressed Threshold Pivoting

Jonathan Hogg
(STFC Rutherford Appleton Laboratory)
Abstract

Traditionally threshold partial pivoting is used to ensure stability of sparse LDL^T factorizations of symmetric matrices. This involves comparing a candidate pivot with all entries in its row/column to ensure that growth in the size of the factors is limited by a threshold at each stage of the factorization. It is capabale of delivering a scaled backwards error on the level of machine precision for practically all real world matrices. However it has significant flaws when used in a massively parallel setting, such as on a GPU or modern supercomputer. It requires all entries of the column to be up-to-date and requires an all-to-all communication for every column. The latter requirement can be performance limiting as the factorization cannot proceed faster than k*(communication latency), where k is the length of the longest path in the sparse elimination tree.

We introduce a new family of communication-avoiding pivoting techniques that reduce the number of messages required by a constant factor allowing the communication cost to be more effectively hidden by computation. We exhibit two members of this family. The first deliver equivalent stability to threshold partial pivoting, but is more pessimistic, leading to additional fill in the factors. The second provides similar fill levels as traditional techniques and, whilst demonstrably unstable for pathological cases, is able to deliver machine accuracy on even the worst real world examples.

Tue, 28 Oct 2014

14:00 - 14:30
L5

The convergence of stationary iterations with indefinite splitting

Andy Wathen
(University of Oxford)
Abstract

The relationship of diagonal dominance ideas to the convergence of stationary iterations is well known. There are a multitude of situations in which such considerations can be used to guarantee convergence when the splitting matrix (the preconditioner) is positive definite. In this talk we will describe and prove sufficient conditions for convergence of a stationary iteration based on a splitting with an indefinite preconditioner. Simple examples covered by this theory coming from Optimization and Economics will be described.

This is joint work with Michael Ferris and Tom Rutherford

Tue, 21 Oct 2014

14:00 - 14:30
L5

Software Carpentry in Computational Science

Aron Ahmadia
(US Army Engineering Research and Development Center)
Abstract
This brief lecture will highlight several best-practice observations and
research for writing software for mathematical research, drawn from a
number of sources, including; Best Practices for Scientific Computing
[BestPractices], Code Complete [CodeComplete], and personal observation
from the presenter.  Specific focus will be given to providing the
definition of important concepts, then describing how to apply them
successfully in day-to-day research settings.  Following the outline from
Best Practices, we will cover the following topics:

* Write Programs for People, Not Computers
* Let the Computer Do the Work
* Make Incremental Changes
* Don't Repeat Yourself (or Others)
* Plan for Mistakes
* Optimize Software Only after It Works Correctly
* Document Design and Purpose, Not Mechanics
* Collaborate

[BestPractices]
http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001745
[CodeComplete] http://www.cc2e.com/Default.aspx
Tue, 14 Oct 2014

14:00 - 14:30
L5

X-ray imaging with emitter arrays

Raphael Hauser
(University of Oxford)
Abstract

We investigate an X-ray imaging system that fires multiple point sources of radiation simultaneously from close proximity to a probe. Radiation traverses the probe in a non-parallel fashion, which makes it necessary to use tomosynthesis as a preliminary step to calculating a 2D shadowgraph. The system geometry requires imaging techniques that differ substantially from planar X-rays or CT tomography. We present a proof of concept of such an imaging system, along with relevant artefact removal techniques.  This work is joint with Kishan Patel.

Mon, 24 Nov 2014

15:45 - 16:45
Oxford-Man Institute

Recombination, Scenario reduction, and nested high order integration with positive weights.

Terry Lyons and Maria Tchernychova
(Oxford University)
Abstract

Cubature is the business of describing a probability measure in terms of an empirical measure sharing its support with the original measure, of small support, and with identical integrals for a class of functions (eg polynomials with degree less than k). 

Applying cubature to already discrete sets of scenarios provides a powerful tool for scenario management and summarising data.  We refer to this process as recombination. It is a feasible operation in real time and has lead to high accuracy pde solvers.

The practical complexity of this operation has changed! By a factor corresponding to the dimension of the space of polynomials. 

We discuss the algorithm and give home computed examples of nested sparse grids with only positive weights in moderate dimensions (eg degree 1-8 in dimension 7).  Positive weights have significant advantage over signed ones when available.
 

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