Clustering, reordering and random graphs

From the point of view of a numerical analyst, I will describe some algorithms for:

• clustering data points based on pairwise similarity,
• reordering a sparse matrix to reduce envelope, two-sum or bandwidth,
• reordering nodes in a range-dependent random graph to reflect the range-dependency,

and point out some connections between seemingly disparate solution techniques. These datamining problems arise across a range of disciplines. I will mention a particularly new and important application from bioinformatics concerning the analysis of gene or protein interaction data.