Coarse-grained simulations of DNA overstretching
Romano, F
Chakraborty, D
Doye, J
Ouldridge, T
Louis, A
(26 Sep 2012)
Simulating a burnt-bridges DNA motor with a coarse-grained DNA model
Šulc, P
Ouldridge, T
Romano, F
Doye, J
Louis, A
(18 Dec 2012)
Coarse-graining DNA for simulations of DNA nanotechnology
Doye, J
Ouldridge, T
Louis, A
Romano, F
Sulc, P
Matek, C
Snodin, B
Rovigatti, L
Schreck, J
Harrison, R
Smith, W
(18 Aug 2013)
DNA hybridization kinetics: zippering, internal displacement and sequence dependence
Ouldridge, T
Šulc, P
Romano, F
Doye, J
Louis, A
(14 Mar 2013)
The role of loop stacking in the dynamics of DNA hairpin formation
Mosayebi, M
Romano, F
Ouldridge, T
Louis, A
Doye, J
(05 Oct 2014)
Modelling toehold-mediated RNA strand displacement
Šulc, P
Ouldridge, T
Romano, F
Doye, J
Louis, A
(12 Nov 2014)
A nucleotide-level coarse-grained model of RNA
Šulc, P
Romano, F
Ouldridge, T
Doye, J
Louis, A
(17 Mar 2014)
Plectoneme tip bubbles: Coupled denaturation and writhing in supercoiled DNA
Matek, C
Ouldridge, T
Doye, J
Louis, A
(10 Apr 2014)
DNA hairpins primarily promote duplex melting rather than inhibiting hybridization
Schreck, J
Ouldridge, T
Romano, F
Sulc, P
Shaw, L
Louis, A
Doye, J
(19 Aug 2014)
Characterizing the bending and flexibility induced by bulges in DNA duplexes
Schreck, J
Ouldridge, T
Romano, F
Louis, A
Doye, J
(19 Dec 2014)