The Weston Library will host a pop-up celebration of the History of Science Museum's centenary on 3 March. Get free tickets for Astrolabes Live and Sumner Brand's centenary lecture. And don't miss the hands-on workshop where you can handle sundials, astrolabes, and Arabic calligraphy and make your own activities.
Calling all Oxford researchers and support staff! You are warmly invited to share your views on research practice, to help us improve support for you, in a short 5-10 minute survey developed by the University’s Research Practice Group.
Mathematical oncologists apply mathematical and computational models to every aspect of cancer biology, from tumor initiation to malignant spread and treatment response. A substantial amount of medical research now focuses on the molecular biology of individual tumors to selectively target pathways involved in tumor progression, leading to careful manipulation of these pathways, and new cell-specific approaches to cancer therapy are now being developed.
Structure-preserving low-regularity integrators for dispersive nonlinear equations
Abstract
Dispersive nonlinear partial differential equations can be used to describe a range of physical systems, from water waves to spin states in ferromagnetism. The numerical approximation of solutions with limited differentiability (low-regularity) is crucial for simulating fascinating phenomena arising in these systems including emerging structures in random wave fields and dynamics of domain wall states, but it poses a significant challenge to classical algorithms. Recent years have seen the development of tailored low-regularity integrators to address this challenge. Inherited from their description of physicals systems many such dispersive nonlinear equations possess a rich geometric structure, such as a Hamiltonian formulation and conservation laws. To ensure that numerical schemes lead to meaningful results, it is vital to preserve this structure in numerical approximations. This, however, results in an interesting dichotomy: the rich theory of existent structure-preserving algorithms is typically limited to classical integrators that cannot reliably treat low-regularity phenomena, while most prior designs of low-regularity integrators break geometric structure in the equation. In this talk, we will outline recent advances incorporating structure-preserving properties into low-regularity integrators. Starting from simple discussions on the nonlinear Schrödinger and the Korteweg–de Vries equation we will discuss the construction of such schemes for a general class of dispersive equations before demonstrating an application to the simulation of low-regularity vortex filaments. This is joint work with Yvonne Alama Bronsard, Valeria Banica, Yvain Bruned and Katharina Schratz.
HJ-sampler: A Bayesian sampler for inverse problems of a stochastic process by leveraging Hamilton--Jacobi PDEs and score-based generative models
Abstract
The interplay between stochastic processes and optimal control has been extensively explored in the literature. With the recent surge in the use of diffusion models, stochastic processes have increasingly been applied to sample generation. This talk builds on the log transform, known as the Cole-Hopf transform in Brownian motion contexts, and extends it within a more abstract framework that includes a linear operator. Within this framework, we found that the well-known relationship between the Cole-Hopf transform and optimal transport is a particular instance where the linear operator acts as the infinitesimal generator of a stochastic process. We also introduce a novel scenario where the linear operator is the adjoint of the generator, linking to Bayesian inference under specific initial and terminal conditions. Leveraging this theoretical foundation, we develop a new algorithm, named the HJ-sampler, for Bayesian inference for the inverse problem of a stochastic differential equation with given terminal observations. The HJ-sampler involves two stages: solving viscous Hamilton-Jacobi (HJ) partial differential equations (PDEs) and sampling from the associated stochastic optimal control problem. Our proposed algorithm naturally allows for flexibility in selecting the numerical solver for viscous HJ PDEs. We introduce two variants of the solver: the Riccati-HJ-sampler, based on the Riccati method, and the SGM-HJ-sampler, which utilizes diffusion models. Numerical examples demonstrate the effectiveness of our proposed methods. This is an ongoing joint work with Zongren Zou, Jerome Darbon, and George Em Karniadakis.
Computing with H2-conforming finite elements in two and three dimensions
Abstract
Fourth-order elliptic problems arise in a variety of applications from thin plates to phase separation to liquid crystals. A conforming Galerkin discretization requires a finite dimensional subspace of H2, which in turn means that conforming finite element subspaces are C1-continuous. In contrast to standard H1-conforming C0-elements, C1-elements, particularly those of high order, are less understood from a theoretical perspective and are not implemented in many existing finite element codes. In this talk, we address the implementation of the elements. In particular, we present algorithms that compute C1-finite element approximations to fourth-order elliptic problems and which only require elements with at most C0-continuity. The algorithms are suitable for use in almost all standard finite element packages. Iterative methods and preconditioners for the subproblems in the algorithm will also be presented.