Fri, 21 Oct 2022

15:00 - 16:00
L5

Kan Extensions and Kan Ensembles in Machine Learning

Dan Shiebler
(Abnormal Security)
Further Information

Right now Dan works as the Head of Machine Learning at Abnormal Security. Previously. He led the Web Ads Machine Learning team at Twitter. Before that he worked as a Staff ML Engineer at Twitter Cortex and a Senior Data Scientist at TrueMotion.

His PhD research at the University of Oxford focused on applications of Category Theory to Machine Learning (advised by Jeremy Gibbons and Cezar Ionescu). Before that he worked as a Computer Vision Researcher at the Serre Lab.

 

You can find out more about Dan here: https://danshiebler.com/ 

Abstract

A common problem in data science is "use this function defined over this small set to generate predictions over that larger set." Extrapolation, interpolation, statistical inference and forecasting all reduce to this problem. The Kan extension is a powerful tool in category theory that generalizes this notion. In this work we explore several applications of Kan extensions to data science. We begin by deriving simple classification and clustering algorithms as Kan extensions and experimenting with these algorithms on real data. Next, we build more complex and resilient algorithms from these simple parts.

Fri, 14 Oct 2022

15:00 - 16:00
L5

Applied Topology for Discrete Structures

Emilie Purvine
(Pacific Northwest National Laboratory)
Further Information

(From PNNL website)

Emilie's academic background is in pure mathematics, with a BS from University of Wisconsin - Madison and a PhD from Rutgers University, her research since joining PNNL in 2011 has focused on applications of combinatorics and computational topology together with theoretical advances needed to support the applications. Over her time at PNNL, Purvine has served as both a primary investigator and technical staff member on several projects in applications ranging from computational chemistry and biology to cybersecurity and power grid modeling. She has authored over 40 technical publications and is currently an associate editor for the Notices of the American Mathematical Society. Purvine also coordinates PNNL’s Postgraduate Organization which plans career development seminars, an annual research symposium, and promotes networking and mentorship for PNNL’s post bachelors, post masters, and post doctorate research associates.

Abstract

Discrete structures have a long history of use in applied mathematics. Graphs and hypergraphs provide models of social networks, biological systems, academic collaborations, and much more. Network science, and more recently hypernetwork science, have been used to great effect in analyzing these types of discrete structures. Separately, the field of applied topology has gathered many successes through the development of persistent homology, mapper, sheaves, and other concepts. Recent work by our group has focused on the convergence of these two areas, developing and applying topological concepts to study discrete structures that model real data.

This talk will survey our body of work in this area showing our work in both the theoretical and applied spaces. Theory topics will include an introduction to hypernetwork science and its relation to traditional network science, topological interpretations of graphs and hypergraphs, and dynamics of topology and network structures. I will show examples of how we are applying each of these concepts to real data sets.

 

 

 

Thu, 10 Nov 2022

12:00 - 13:00
L1

Plant morphogenesis across scales

Prof. Arezki Boudaoud
(Ecole Polytechnique)
Further Information

Biography

After a doctorate in physics at the École normale supérieure in Paris, Arezki Boudaoud completed his post-doctorate in the Mathematics Department of the prestigious MIT (Massachusetts Institute of Technology). He then returned to the Statistical Physics Laboratory of the ENS ULM as a research officer. His work focused on liquid films and thin solids. In parallel, he began to take an interest in morphogenesis in the living and identified the contributions of the mechanical forces to the growth of yeast and the development of plants.

In 2009 the physicist switched to study biology: he joined the École normale supérieure de Lyon as a professor in the Department of Biology and has since led an interdisciplinary team in the Reproduction and development of Plants (RDP) laboratory and the Joliot-Curie laboratory (LJC). The team, entitled "Biophysics and Development", works to understand the mechanisms of morphogenesis in plants, combining tools of biology and physics.

Taken from ENS Lyon website

Abstract

What sets the size and form of living organisms is still, by large, an open question. During this talk, I will illustrate how we are addressing this question by examining the links between spatial scales, from subcellular to organ, both experimentally and theoretically. First, I will present how we are deriving continuous plant growth mechanical models using homogenisation. Second, I will discuss how directionality of organ growth emerges from cell level. Last, I will present predictions of fluctuations at multiple scales and experimental tests of these predictions, by developing a data analysis approach that is broadly relevant to geometrically disordered materials.

 

Mon, 14 Nov 2022

15:30 - 16:30
L1

Minimum curvature flow and martingale exit times

Johannes Ruf
Abstract

What is the largest deterministic amount of time T that a suitably normalized martingale X can be kept inside a convex body K in Rd? We show, in a viscosity framework, that T equals the time it takes for the relative boundary of K to reach X(0) as it undergoes a geometric flow that we call (positive) minimum curvature flow. This result has close links to the literature on stochastic and game representations of geometric flows. Moreover, the minimum curvature flow can be viewed as an arrival time version of the Ambrosio–Soner codimension-(d − 1) mean curvature flow of the 1-skeleton of K. We present very preliminary sampling-based numerical approximations to the solution of the corresponding PDE. The numerical part is work in progress.

This work is based on a collaboration with Camilo Garcia Trillos, Martin Larsson, and Yufei Zhang.

Mon, 31 Oct 2022

15:30 - 16:30
L1

Some aspects of the Anderson Hamiltonian with white noise

Laure Dumaz
Abstract

In this talk, I will present several results on the Anderson Hamiltonian with white noise potential in dimension 1. This operator formally writes « - Laplacian + white noise ». It arises as the scaling limit of various discrete models and its explicit potential allows for a detailed description of its spectrum. We will discuss localization of its eigenfunctions as well as the behavior of the local statistics of its eigenvalues. Around large energies, we will see that the eigenfunctions are localized and follow a universal shape given by the exponential of a Brownian motion plus a drift, a behavior already observed by Rifkind and Virag in tridiagonal matrix models. Based on joint works with Cyril Labbé.

Quantifying the Limits of Immunotherapies in Mice and Men
Brown, L Gaffney, E Ager, A Wagg, J Coles, M (2019)
Computer-assisted beat-pattern analysis and the flagellar waveforms of bovine spermatozoa
Walker, B Phuyal, S Ishimoto, K Tung, C Gaffney, E (2020)
Thu, 24 Nov 2022

16:00 - 17:00
L3

Graph-based Methods for Forecasting Realized Covariances

Chao Zhang
Abstract

We forecast the realized covariance matrix of asset returns in the U.S. equity market by exploiting the predictive information of graphs in volatility and correlation. Specifically, we augment the Heterogeneous Autoregressive (HAR) model via neighborhood aggregation on these graphs. Our proposed method allows for the modeling of interdependence in volatility (also known as spillover effect) and correlation, while maintaining parsimony and interpretability. We explore various graph construction methods, including sector membership and graphical LASSO (for modeling volatility), and line graph (for modeling correlation). The results generally suggest that the augmented model incorporating graph information yields both statistically and economically significant improvements for out-of-sample performance over the traditional models. Such improvements remain significant over horizons up to one month ahead, but decay in time. The robustness tests demonstrate that the forecast improvements are obtained consistently over the different out-of-sample sub-periods, and are insensitive to measurement errors of volatilities.

Mon, 17 Oct 2022

15:30 - 16:30
L1

Regularisation of differential equations by multiplicative fractional noises

Konstantinos Dareiotis
Abstract

In this talk, we consider differential equations perturbed by multiplicative fractional Brownian noise. Depending on the value of the Hurst parameter $H$, the resulting equation is pathwise viewed as an ordinary ($H>1$), Young  ($H \in (1/2, 1)$) or rough  ($H \in (1/3, 1/2)$) differential equation. In all three regimes we show regularisation by noise phenomena by proving the strongest kind of well-posedness  for equations with irregular drifts: strong existence and path-by-path uniqueness. In the Young and smooth regime $H>1/2$ the condition on the drift coefficient is optimal in the sense that it agrees with the one known for the additive case.

In the rough regime $H\in(1/3,1/2)$ we assume positive but arbitrarily small drift regularity for strong 
well-posedness, while for distributional drift we obtain weak existence. 

This is a joint work with Máté Gerencsér.

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