Forthcoming events in this series
The mechanics of physical knots: from shoelaces to surgical sutures
Pedro M. Reis
Flexible Structures Laboratory,
Institute of Mechanical Engineering,
Ecole Polytechnique Fédérale de Lausanne (EPFL),
Pedro Miguel Reis is a Professor of Mechanical Engineering at the École Polytechnique Fédérale de Lausanne (EPFL) in Switzerland. Prof. Reis received a B.Sc. in Physics from the University of Manchester, UK (1999), a Certificate of Advanced Studies in Mathematics (Part III Maths) from St. John’s College and DAMTP, University of Cambridge (2000), and a Ph.D. in physics from the University of Manchester (2004). He was a postdoc at the City College of New York (2004-2005) and at the CNRS/ESPCI in Paris (2005-2007). He joined MIT in 2007 as an Instructor in Applied Mathematics. In 2010, he moved to MIT’s School of Engineering, with dual appointments in Mechanical Engineering and Civil & Environmental Engineering, first as the Esther and Harold E. Edgerton Assistant Professor and, after 2014, as Gilbert W. Winslow Associate Professor. In October 2013, the Popular Science magazine named Prof. Reis to its 2013 “Brilliant 10” list of young stars in Science and Technology. In 2021, he was the President of the Society of Engineering Science (SES). Prof. Reis has also received the 2014 CAREER Award (NSF), the 2016 Thomas J.R. Hughes Young Investigator Award (Applied Mechanics Division of the ASME), the 2016 GSOFT Early Career Award for Soft Matter Research (APS), and he is a Fellow of the American Physical Society (APS).
Abstract
Even though most of us tie our shoelaces "wrongly," knots in ropes and filaments have been used as functional structures for millennia, from sailing and climbing to dewing and surgery. However, knowledge of the mechanics of physical knots is largely empirical, and there is much need for physics-based predictive models. Tight knots exhibit highly nonlinear and coupled behavior due to their intricate 3D geometry, large deformations, self-contact, friction, and even elasto-plasticity. Additionally, tight knots do not show separation of the relevant length scales, preventing the use of centerline-based rod models. In this talk, I will present an overview of recent work from our research group, combining precision experiments, Finite Element simulations, and theoretical analyses. First, we study the mechanics of two elastic fibers in frictional contact. Second, we explore several different knotted structures, including the overhand, figure-8, clove-hitch, and bowline knots. These knots serve various functions in practical settings, from shoelaces to climbing and sailing. Lastly, we focus on surgical knots, with a particularly high risk of failure in clinical settings, including complications such as massive bleeding or the unraveling of high-tension closures. Our research reveals a striking and robust power law, with a general exponent, between the mechanical strength of surgical knots, the applied pre-tension, and the number of throws, providing new insights into their operational and safety limits. These findings could have potential applications in the training of surgeons and enhanced control of robotic-assisted surgical devices.
Isolating internal waves using on-the-fly Lagrangian filtering in numerical simulations
Dr Lois Baker is the Flora Philip Fellow and EPSRC National Fellow in Fluid Dynamicsa in the School of Mathematics at the University of Edinburgh. Her research involves using mathematical and numerical models to understand oceanic fluid dynamics. Baker is particularly interested in the interactions of internal waves and submesoscale vortices that are generated in the deep and upper ocean.
Abstract
In geophysical and astrophysical flows, we are often interested in understanding the impact of internal waves on the non-wavelike flow. For example, oceanic internal waves generated at the surface and the seafloor transfer energy from the large scale flow to dissipative scales, thereby influencing the global ocean state. A primary challenge in the study of wave-flow interactions is how to separate these processes – since waves and non-wavelike flows can vary on similar spatial and temporal scales in the Eulerian frame. However, in a Lagrangian flow-following frame, temporal filtering offers a convenient way to isolate waves. Here, I will discuss a recently developed method for evolving Lagrangian mean fields alongside the governing equations in a numerical simulation, and extend this theory to allow effective filtering of waves from non-wavelike processes.
Patterned illumination for complex spatio-temporal morphing of LCE sheets
Biography
John Biggins read natural sciences at Cambridge University. He specialized in experimental and theoretical physics, and was the top ranked student in his cohort. He then did a PhD in the theory of condensed matter group under the supervision of Prof Mark Warner FRS, working on the exotic elasticity of a new phase of soft matter known as a liquid crystal elastomer (LCE). During his PhD he made an extended visit to Caltech to work with Prof Kaushik Bhattacharya on analogies between LCEs and shape memory alloys.
After his PhD, John won an 1851 Royal Commission Fellowship and traveled to Harvard to work with Prof L. Mahadevan on instabilities in soft solids and biological tissues, including creasing, fingering and brain folding. He then returned to Cambridge, first as Walter Scott Research Fellow at Trinity Hall and then as an early career lecturer in the tcm group at the Cavendish Laboratory. During this time, he explained the viral youtube phenomena of the chain fountain, and explored how surface tension can sculpt soft solids, leading to a solid analogue of the Plateau–Rayleigh instability. He also taught first year oscillations, and a third year course "theoretical physics 1."
In 2017, John was appointed to an Assistant Professorship of applied mechanics in Cambridge Engineering Department, where he teaches mechanics and variational methods. In 2019 he won a UKRI Future Leaders Fellowship on "Liquid Crystal Elastomers, from new materials via new mechanics to new machines." This grant added an exciting experimental component to the group, and underpins our current focus on using LCEs as artificial muscles in soft mechanical devices.
Abstract
Liquid crystal elastomers are rubbery solids containing molecular LC rods that align along a common director. On heating, the alignment is disrupted, leading to a substantial (~50%) contraction along the director. In recent years, there has been a great deal of interest in fabrication LCE sheets with a bespoke alignment pattern. On heating, these patterns generate corresponding patterns of contraction that can morph a sheet into a bespoke curved surface such as a cone or face. Moreover, LCEs can also be activated by light, either photothermally or photochemically, leading to similarly large contractions. Stimulation by light also introduces an important new possibility: using spatio-temporal patterns of illumination to morph a single LCE sample into a range of different surfaces. Such stimulation can enable non-reciprocal actuation for viscous swimming or pumping, and control over the whole path taken by the sheet through shape-space rather than just the final destination. In this talk, I will start by with an experimental example of a spatio-temporal pattern of illumination being used to actuate an LCE peristaltic pump. I will then introduce a second set of experiments, in which a monodomain sheet morphs first into a cone, an anti-cone and then an array of cones upon exposure to different patterns of illumination. Finally, I will then discuss the general problem of how to choose a pattern of illumination to morph a director-patterned sheet into an arbitrary surface, first analytically for axisymmetric cases, then numerically for low symmetry cases. This last study exceeds our current experimental capacity, but highlights how, with full spatio-temporal control over the stimulation magnitude, one can choreograph an LCE sheet to undergo almost any pattern of morphing.
Mathematical models for biological cooperation: lessons from bacteria
Maria is a member of the Biological Fluid Mechanics group. Her current research interests revolve around the themes of flows (flows around and in between filaments, flows in membranes), motors (in particular, bacterial flagellar motors) and oscillators (synchronization of coupled non-linear oscillators, and biological rhythms more broadly).
Abstract
applied mathematics.
Modelling liquid infiltration in a porous medium: perils of oversimplification
Abstract
Mathematical modelling can support decontamination processes in a variety of ways. In this talk, we focus on the contamination step: understanding how much of a chemical spill has seeped into the Earth or a building material, and how far it has travelled, are essential for making good decisions about how to clean it up.
We consider an infiltration problem in which a chemical is poured on an initially unsaturated porous medium, and seeps into it via capillary action. Capillarity-driven flow through partially-saturated porous media is often modelled using Richards’ equation, which is a simplification of the Buckingham-Darcy equation in the limit where the infiltrating phase is much more viscous than the receding phase. In this talk, I will explore the limitations of Richards equation, and discuss some scenarios in which predictions for small-but-finite viscosity ratios are very different to the Richards simplification.
Models of viscous anisotropy
Abstract
What do fiber polymers and ice sheets have in common? They both flow with a directionally dependent - anisotropic - viscosity. This behaviour occurs in other geophysical flows, such as the Earth's mantle, where a material's microstructure affects its large-scale flow. In ice, the alignment of crystal orientations can cause the viscosity to vary by an order of magnitude, consequently having a strong impact on the flow of ice sheets and glaciers. However, the effect of anisotropy on large-scale flow is not well understood, due to a lack of understanding of a) the best physical approximations to model crystal orientations, and b) how crystal orientations affect rheology. In this work, we aim to address both these questions by linking rheology to crystal orientation predictions, and testing a range of models against observations from the Greenland ice sheet. The results show assuming all grains experience approximately the same stress provides realistic predictions, and we suggest a set of equations and parameters which can be used in large-scale models of ice sheets.
Path integral formulation of stochastic processes
Abstract
Traditionally, stochastic processes are modelled one of two ways: a continuum Fokker-Planck approach, where a PDE is solved to determine the time evolution of the probability density, or a Langevin approach, where the SDE describing the system is sampled, and multiple simulations are used to collect statistics. There is also a third way: the functional or path integral. Originally developed by Wiener in the 1920s to model Brownian motion, path integrals were famously applied to quantum mechanics by Feynman in the 1950s. However, they also have much to offer classical stochastic processes (and statistical physics).
In this talk I will introduce the formalism at a physicist’s level of rigour, and focus on determining the dominant contribution to the path integral when the noise is weak. There exists a remarkable correspondence between the most-probable stochastic paths and Hamiltonian dynamics in an effective potential [1,2,3]. I will then discuss some applications, including reaction pathways conditioned on finite time [2]. We demonstrate that the most probable pathway at a finite time may be very different from the usual minimum energy path used to calculate the average reaction rate. If time permits, I will also discuss the extremely nonlinear crystal dislocation response to applied stress [4].
[1] Ge, Hao, and Hong Qian. Int. J. Mod. Phys. B 26.24 1230012 (2012)
[2] Fitzgerald, Steve, et al. J. Chem. Phys. 158.12 (2023).
[3] Honour, Tom and Fitzgerald, Steve. in press J. Phys. A (2024)
[4] Fitzgerald, Steve. Sci. Rep. 6 (1) 39708 (2016)
Static friction models, buckling and lift-off for a rod deforming on a cylinder
Dr. Rehan Shah, Lecturer (Assistant Professor) in Mathematics and Engineering Education, Queen Mary University of London
Abstract
We develop a comprehensive geometrically-exact theory for an end-loaded elastic rod constrained to deform on a cylindrical surface. By viewing the rod-cylinder system as a special case of an elastic braid, we are able to obtain all forces and moments imparted by the deforming rod to the cylinder as well as all contact reactions. This framework allows us to give a complete treatment of static friction consistent with force and moment balance. In addition to the commonly considered model of hard frictionless contact, we analyse two friction models in which the rod, possibly with intrinsic curvature, experiences either lateral or tangential friction. As applications of the theory we study buckling of the constrained rod under compressive and torsional loads, finding critical loads to depend on Coulomb-like friction parameters, as well as the tendency of the rod to lift off the cylinder under further loading. The cylinder can also have arbitrary orientation relative to the direction of gravity. The cases of a horizontal and vertical cylinder, with gravity having only a lateral or axial component, are amenable to exact analysis, while numerical results map out the transition in buckling mechanism between the two extremes. Weight has a stabilising effect for near-horizontal cylinders, while for near-vertical cylinders it introduces the possibility of buckling purely due to self-weight. Our results are relevant for many engineering and medical applications in which a slender structure winds inside or outside a cylindrical boundary.
Short- and late-time behaviours of Fokker-Planck equations for heterogeneous diffusions
Abstract
The Fokker-Planck equation is one of the major tools of statistical physics in the description of stochastic processes, with numerous applications in physics, chemistry and biology. In the case of heterogeneous diffusions, the formulation of the equation depends on the choice of the discretization of the stochastic integral in the underlying Langevin-equation due to the multiplicative noise. In the Fokker-Planck equation, the choice of discretization then enters as a parameter in the definition of drift and diffusion terms. I show how both short- and long-time limits are affected by this choice. In the long-time limit, the existence of normalizable probability distribution functions is not always guaranteed which can be remedied by invoking elements of infinite ergodic theory.
[1] S. Giordano, F. Cleri, R. Blossey, Phys Rev E 107, 044111 (2023)
[2] T. Dupont, S. Giordano, F. Cleri, R. Blossey, arXiv:2401.01765 (2024)
Structural identifiability analysis: An important tool in systems modelling
Abstract
For many systems (certainly those in biology, medicine and pharmacology) the mathematical models that are generated invariably include state variables that cannot be directly measured and associated model parameters, many of which may be unknown, and which also cannot be measured. For such systems there is also often limited access for inputs or perturbations. These limitations can cause immense problems when investigating the existence of hidden pathways or attempting to estimate unknown parameters and this can severely hinder model validation. It is therefore highly desirable to have a formal approach to determine what additional inputs and/or measurements are necessary in order to reduce or remove these limitations and permit the derivation of models that can be used for practical purposes with greater confidence.
Structural identifiability arises in the inverse problem of inferring from the known, or assumed, properties of a biomedical or biological system a suitable model structure and estimates for the corresponding rate constants and other model parameters. Structural identifiability analysis considers the uniqueness of the unknown model parameters from the input-output structure corresponding to proposed experiments to collect data for parameter estimation (under an assumption of the availability of continuous, noise-free observations). This is an important, but often overlooked, theoretical prerequisite to experiment design, system identification and parameter estimation, since estimates for unidentifiable parameters are effectively meaningless. If parameter estimates are to be used to inform about intervention or inhibition strategies, or other critical decisions, then it is essential that the parameters be uniquely identifiable.
Numerous techniques for performing a structural identifiability analysis on linear parametric models exist and this is a well-understood topic. In comparison, there are relatively few techniques available for nonlinear systems (the Taylor series approach, similarity transformation-based approaches, differential algebra techniques and the more recent observable normal form approach and symmetries approaches) and significant (symbolic) computational problems can arise, even for relatively simple models in applying these techniques.
In this talk an introduction to structural identifiability analysis will be provided demonstrating the application of the techniques available to both linear and nonlinear parameterised systems and to models of (nonlinear mixed effects) population nature.
Ocean dynamics on the margin of rotational control
Professor Taylor's research focuses on the fluid dynamics of the ocean. He is particularly interested in ocean turbulence and mixing, ocean fronts and the surface boundary layer, and the impact of turbulence on micro-organisms. Recent work has uncovered a fascinating and poorly-understood collection of processes occurring at relatively small scales (<O(10km)) where the vertical motion is strong but stratification and the Earth's rotation are important factors. Since these motions are too small to be directly resolved by global ocean and climate models, understanding their impact on the structure and dynamics of the ocean is one of the most pressing topics in physical oceanography. Currently, he is studying the dynamics of upper ocean fronts, the turbulent boundary layer beneath melting ice shelves, stratified turbulence, and the influence of physical processes on biogeochemical dynamics. Please see his homepage here for more information. https://www.damtp.cam.ac.uk/person/jrt51
Abstract
Global scale ocean currents are strongly constrained by the Earth’s rotation, while this effect is generally negligible at small scales. In between, motions with scales from 1-10km are marginally affected by the Earth’s rotation. These intermediate scales, collectively termed the ocean submesoscale, have been hidden from view until recent years. Evidence from field measurements, numerical models, and satellite data have shown that submesoscales play a particularly important role in the upper ocean where they help to control the transport of material between the ocean surface and interior. In this talk I will review some recent work on submesoscale dynamics and their influence on biogeochemistry and accumulation of microplastics in the surface waters.
Stop-and-go, hovercrafts and helicopters: the complex motility of droplet microswimmers driven by interfacial instabilities
Abstract
One hallmark of active or living matter lies in the conversion of microscopic free fuel energy to mesoscopic directed motion. Bio-microswimmers have evolved complex and sophisticated motility, like helical swimming or run-and-tumble dynamics, with similarly complex mechanical or biochemical actuation.
Collective motion and environmental path entropy
Matthew Turner is a Professor in the Physics department, attached to the Complexity center, at Warwick University. He works on Biological and Soft Matter Physics, amongst other things.
Abstract
We study “bottom-up” models for the collective motion of large groups of animals. Similar models can be encoded into (micro)robotic matter, capable of sensing light and processing information. Agents are endowed only with visual sensing and information processing. We study a model in which moving agents reorientate to maximise the path-entropy of their visual environment over paths into the future. There are general arguments that principles like this that are based on retaining freedom in the future may confer fitness in an uncertain world. Alternative “top-down” models are more common in the literature. These typically encode coalignment and/or cohesion directly and are often motivated by models drawn from physics, e.g. describing spin systems. However, such models can usually give little insight into how co-alignment and cohesion emerge because these properties are encoded in the model at the outset, in a top-down manner. We discuss how our model leads to dynamics with striking similarities with animal systems, including the emergence of coalignment, cohesion, a characteristic density scaling anddifferent behavioural phenotypes. The dynamics also supports a very unusual order-disorder transition in which the order (coalignment) initially increases upon the addition of sensory or behavioural noise, before decreasing as the noise becomes larger.
Coupling rheology and segregation in granular flows
Professor Nico Gray is based in the Department of Mathematics at the University of Manchester.
This is from his personal website:
My research interests lie in understanding and modelling the flow of granular materials, in small scale experiments, industrial processes and geophysical flows. Current research is aimed at understanding fundamental processes such as the flow past obstacles, shock waves, dead-zones, fluid-solid phase transitions, particle size segregation and pattern formation. A novel and important feature of all my work is the close interplay of theory, numerical computation and experiment to investigate these nonlinear systems. I currently have three active experiments which are housed in two laboratories at the Manchester Centre for Nonlinear Dynamics. You can click on the videos and pictures as well as the adjacent toolbar to find out more about specific problems that I am interested in. |
Abstract
During the last fifteen years, there has been a paradigm shift in the continuum modelling of granular materials; most notably with the development of rheological models, such as the μ(I)-rheology (where μ is the friction and I is the inertial number), but also with significant advances in theories for particle segregation. This talk details theoretical and numerical frameworks (based on OpenFOAM®) which unify these disconnected endeavours. Coupling the segregation with the flow, and vice versa, is not only vital for a complete theory of granular materials, but is also beneficial for developing numerical methods to handle evolving free surfaces. This general approach is based on the partially regularized incompressible μ(I)-rheology, which is coupled to a theory for gravity/shear-driven segregation (Gray & Ancey, J. Fluid Mech., vol. 678, 2011, pp. 353–588). These advection–diffusion–segregation equations describe the evolving concentrations of the constituents, which then couple back to the variable viscosity in the incompressible Navier–Stokes equations. A novel feature of this approach is that any number of differently sized phases may be included, which may have disparate frictional properties. The model is used to simulate the complex particle-size segregation patterns that form in a partially filled triangular rotating drum. There are many other applications of the theory to industrial granular flows, which are the second most common material used after fluids. The same processes also occur in geophysical flows, such as snow avalanches, debris flows and dense pyroclastic flows. Depth-averaged models, that go beyond the μ(I)-rheology, will also be derived to capture spontaneous self-channelization and levee formation, as well as complex segregation-induced flow fingering effects, which enhance the run-out distance of these hazardous flows.
Droplet dynamics in the presence of gas nanofilms: merging, wetting, bouncing & levitation
Abstract
Recent advances in experimental techniques have enabled remarkable discoveries and insight into how the dynamics of thin gas/vapour films can profoundly influence the behaviour of liquid droplets: drops impacting solids can “skate on a film of air” [1], so that they can “bounce off walls” [2,3]; reductions in ambient gas pressure can suppress splashing [4] and initiate the merging of colliding droplets [5]; and evaporating droplets can levitate on their own vapour film [7] (the Leidenfrost effect). Despite these advances, the precise physical mechanisms governing these phenomena remains a topic of debate. A theoretical approach would shed light on these issues, but due to the strongly multiscale nature of these processes brute force computation is infeasible. Furthermore, when films reach the scale of the mean free path in the gas (i.e. ~100nm) and below, new nanoscale physics appears that renders the classical Navier-Stokes paradigm inaccurate.
In this talk, I will overview our development of efficient computational models for the aforementioned droplet dynamics in the presence of gas nanofilms into which gas-kinetic, van der Waals and/or evaporative effects can be easily incorporated [8,9]. It will be shown that these models can reproduce experimental observations – for example, the threshold between bouncing and wetting for drop impact on a solid is reproduced to within 5%, whilst a model excluding either gas-kinetic or van der Waals effects is ~170% off! These models will then be exploited to make new experimentally-verifiable predictions, such as how we expect drops to behave in reduced pressure environments. Finally, I will conclude with some exciting directions for future wor
[1] JM Kolinski et al, Phys. Rev. Lett. 108 (2012), 074503. [2] JM Kolinski et al, EPL. 108 (2014), 24001. [3] J de Ruiter et al, Nature Phys. 11 (2014), 48. [4] L Xu et al, Phys. Rev. Lett. 94 (2005), 184505. [5] J Qian & CK Law, J. Fluid. Mech. 331 (1997), 59. [6] KL Pan J. Appl. Phys. 103 (2008), 064901. [7] D Quéré, Ann. Rev. Fluid Mech. 45 (2013), 197. [8] JE Sprittles, Phys. Rev. Lett. 118 (2017), 114502. [9] MV Chubynsky et al, Phys. Rev. Lett.. 124 (2020), 084501.
Financial Health in Banking - combining automation and optimisation techniques in a multi-problem setup
Abstract
Predictive scoring modelling is a common approach to measure financial health and credit worthiness in banking. Whilst the latter is a key factor in making decisions for lending, evaluating financial health helps to identify vulnerable customers trending towards financial hardship, who need support. The current macroeconomic uncertainties amplify the importance of extensive flexibility in modelling data solutions so that they can remain effective and adaptive to a volatile economic environment. This workshop is focused on discussing relevant techniques and mathematical methodologies which can help modernise traditional scoring models and accelerate innovation. In summary, the problem definition in the banking context is how automation and optimality can be achieved in a multiobjective problem where a subset of existing data features should be selected by relevance and uniqueness, assigned scoring weights by importance and how a pool of customers can be categorised accordingly using their individual scores and auto-adjusting thresholds of risk classification scales. The key challenge is imposed by the mutual dependency of the three sub-problems and their objectives. Introducing or removing constraints in any of them can change the feasibility and optimality of the others and the overall solution. It is common for traditional scoring models to be mainly focused on the predictive accuracy and their setup is often defined and revised manually, following ad-hoc exploratory data analysis and business-led decision making. An automated optimisation of the data features’ selection, scoring weights and classification thresholds definition can achieve respectively: ▪ Precise financial health evaluation and book classification under changing economic climate; ▪ Development of innovative data-driven solutions to enhance prevention from financial hardship and bankruptcies.
Elastocapillary windlass in one and two dimensions
Abstract
Capillary forces acting at the surface of a liquid drop can be strong enough to deform small objects and recent studies have provided several examples of elastic instabilities induced by surface tension. Inspired by the windlass mechanism in spider webs, we present a system where a liquid drop sits on a straight fiber and attracts the fiber which thereby coils inside the drop. We then introduce a 2D extension of the mechanism and build a membrane that can extend/contract by a factor of 20.
Reframing biological function as a learning problem
Andrea Jo-Wei Liu is the Hepburn Professor of Physics at the University of Pennsylvania, where she holds a joint appointment in the Department of Chemistry. She is a theoretical physicist studying condensed matter physics and biophysics.
Abstract
In order for artificial neural networks to learn a task, one must solve an inverse design problem. What network will produce the desired output? We have harnessed AI approaches to design physical systems to perform functions inspired by biology, such as protein allostery. But artificial neural networks require a computer in order to learn in top-down fashion by the global process of gradient descent on a cost function. By contrast, the brain learns by local rules on its own, with each neuron adjusting itself and its synapses without knowing what all the other neurons are doing, and without the aid of an external computer. But the brain is not the only biological system that learns by local rules; I will argue that the actin cortex and the amnioserosa during the dorsal closure stage of Drosophila development can also be viewed this way.
Model and data fusion: physics-driven learning in cancer research
Abstract
The key role of physical and mechanical interactions in cancer emerges from a very large variety of data sources and methods - from genomics to bioimaging, from proteomics to clinical records. Thus, learning physics-driven relational information is crucial to characterize its progression at different scales.
In this talk I will discuss how mathematical and computational tools allow for learning and better understanding of the mechano-biology of cancer, thanks to the integration of patient-specific data and physics-based models. I will present a few applications developed in the last decade in which the development of digital twins, empowered by ad-hoc learning tools, allows us to test new hypotheses, to assess the model predictions against biological and clinical data, and to aid decision-making in a clinical setting.
Funding from MUR - PRIN 2020, Progetto di Eccellenza 2023-2027 and Regione Lombardia (NEWMED Grant, ID: 117599, POR FESR 2014-2020) is gratefully acknowledged.
Adjoint-accelerated Bayesian Inference for joint reconstruction and segmentation of Flow-MRI images
Abstract
We formulate and solve a generalized inverse Navier–Stokes boundary value problem for velocity field reconstruction and simultaneous boundary segmentation of noisy Flow-MRI velocity images. We use a Bayesian framework that combines CFD, Gaussian processes, adjoint methods, and shape optimization in a unified and rigorous manner.
With this framework, we find the velocity field and flow boundaries (i.e. the digital twin) that are most likely to have produced a given noisy image. We also calculate the posterior covariances of the unknown parameters and thereby deduce the uncertainty in the reconstructed flow. First, we verify this method on synthetic noisy images of flows. Then we apply it to experimental phase contrast magnetic resonance (PC-MRI) images of an axisymmetric flow at low and high SNRs. We show that this method successfully reconstructs and segments the low SNR images, producing noiseless velocity fields that match the high SNR images, using 30 times less data.
This framework also provides additional flow information, such as the pressure field and wall shear stress, accurately and with known error bounds. We demonstrate this further on a 3-D in-vitro flow through a 3D-printed aorta and 3-D in-vivo flow through a carotid artery.
Does Maxwell’s hypothesis of air saturation near the surface of evaporating liquid hold at all spatial scales?
Abstract
The classical model of evaporation of liquids hinges on Maxwell’s assumption that the air near the liquid’s surface is saturated. It allows one to find the evaporative flux without considering the interface separating liquid and air. Maxwell’s hypothesis is based on an implicit assumption that the vapour-emission capacity of the interface exceeds the throughput of air (i.e., its ability to pass the vapour on to infinity). If indeed so, the air adjacent to the liquid would get quickly saturated, justifying Maxwell’s hypothesis.
In the present paper, the so-called diffuse-interface model is used to account for the interfacial physics and, thus, derive a generalised version of Maxwell’s boundary condition for the near-interface vapour density. It is then applied to a spherical drop floating in air. It turns out that the vapour-emission capacity of the interface exceeds the throughput of air only if the drop’s radius is rd ≳ 10μm, but for rd ≈ 2μm, the two are comparable. For rd ≲ 1μm, evaporation is interface-driven, and the resulting evaporation rate is noticeably smaller than that predicted by the classical model.
Surprises in a classic boundary-layer problem
Abstract
Over the years, I've often taught a first course in asymptotics and perturbation methods, even though I don't know much about the subject. In this talk, I'll discuss a textbook example of a singularly perturbed nonlinear boundary-value problem that has revealed delightful new surprises, every time I teach it. These include a pitchfork bifurcation in the number of solutions as one varies the small parameter, and transcendentally small terms in the solutions' initial conditions that can be calculated by elementary means.
12:00
Reconciling ecology and evolutionary game theory: or ‘when not to think cooperation’
Abstract
I’m excited to share with everyone some new, unpublished work that we are just in the process of wrapping up and could use everyone’s reactions. It is a reconciliation of evolutionary game theory and ecological dynamics that I have wrestled with since I moved from an evolution program into an ecology-heavy department. It always seemed like, depending on the problem I was thinking about, I had to change my perspective and approach it as either an evolutionary game theorist, or an ecologist; and yet I had this nagging feeling that, at its core, the problem was often one and the same, and therefore one theoretical framework should suffice. So when should one write down an n-type replicator equation and when should one write down an n-species Lotka-Volterra system; and what does it mean mathematically and biologically when one has made such a choice? In the process of reconciling, I also got a deeper appreciation of what is and is not a proper game, such as a Prisoner’s Dilemma. These findings can help shed light on previously puzzling empirical findings.
Mathematical Modelling of Metal Forming
Abstract
Metal forming involves permanently deforming metal into a required shape. Many forms of metal forming are used in industry: rolling, stamping, pressing, drawing, etc; for example, 99% of steel produced globally is first rolled before any subsequent processing. Most theoretical studies of metal forming use Finite Elements, which is not fast enough for real-time control of metal forming processes, and gives little extra insight. As an example of how little is known, it is currently unknown whether a sheet of metal that is squashed between a large and a small roller should curve towards the larger roller, or towards the smaller roller. In this talk, I will give a brief overview of metal forming, and then some progress my group have been making on some very simplified models of cold sheet rolling in particular. The mathematics involved will include some modelling and asymptotics, multiple scales, and possibly a matrix Wiener-Hopf problem if time permits.