Forthcoming events in this series


Thu, 23 Oct 2025

12:00 - 13:00
L3

Master Stability for Traveling Waves on Networks

Stefan Ruschel
(University of Leeds)
Further Information

Stefan Ruschel’s research focuses on dynamical systems theory and its applications to nonlinear optics and mathematical biology, among others. He specialises in analytical and numerical methods for delay differential and functional differential equations when the delay is large compared to other time scales of the system. His specific contributions include work on the fixed point spectrum for large delay, as well as the characterisation of slowly oscillating solutions such as travelling pulses and waves.

His future research is dedicated to applying these techniques to delay and lattice dynamical systems arising from coupled excitable and coupled bi-stable systems in laser dynamics and neuroscience, where such solutions play an important role in data transmission and neural signal propagation.

He is currently a research fellow at the University of Leeds (UK), funded by UKRI in recognition of a Horizon Europe MSCA award post-Brexit.

Abstract

 I will present a new framework for determining effectively the spectrum and stability of traveling waves on networks with symmetries, such as rings and lattices, by computing master stability curves (MSCs). Unlike traditional methods, MSCs are independent of system size and can be readily used to assess wave destabilization and multi-stability in small and large networks.

 

 

 

Thu, 16 Oct 2025

12:00 - 13:00
L3

Think Global, Act Local: A Mathematician's Guide to Inducing Localised Patterns

Dan J. Hill
(University of Oxford)
Further Information

Dan is a recently appointed Hooke Fellow within OCIAM. His research focus is on pattern formation and the emergence of localised states in PDE models, with an emphasis on using polar coordinate systems to understand nonlinear behaviour in higher spatial dimensions. He received his MMath and PhD from the University of Surrey, with a thesis on the existence of localised spikes on the surface of a ferrofluid, and previously held postdoctoral positions at Saarland University, including an Alexander von Humboldt Postdoctoral Fellowship. www.danjhill.com

Abstract
The existence of localised two-dimensional patterns has been observed and studied in numerous experiments and simulations: ranging from optical solitons, to patches of desert vegetation, to fluid convection. And yet, our mathematical understanding of these emerging structures remains extremely limited beyond one-dimensional examples.
 
In this talk I will discuss how adding a compact region of spatial heterogeneity to a PDE model can not only induce the emergence of fully localised 2D patterns, but also allows us to rigorously prove and characterise their bifurcation. The idea is inspired by experimental and numerical studies of magnetic fluids and tornados, where our compact heterogeneity corresponds to a local spike in the magnetic field and temperature gradient, respectively. In particular, we obtain local bifurcation results for fully localised patterns both with and without radial or dihedral symmetry, and rigorously continue these solutions to large amplitude. Notably, the initial bifurcating solution (which can be stable at bifurcation) varies between a radially-symmetric spot and a 'dipole' solution as the width of the spatial heterogeneity increases. 
 
This work is in collaboration with David J.B. Lloyd and Matthew R. Turner (both University of Surrey).
 
 
Wed, 17 Sep 2025
11:15
L3

The KdV equation: exponential asymptotics, complex singularities and Painlevé II

Scott W. McCue
(School of Mathematical Sciences Queensland University of Technology Brisbane)

Note: we would recommend to join the meeting using the Teams client for best user experience.

Further Information

Scott W. McCue is Professor of Applied Mathematics at Queensland University of Technology. His research spans interfacial dynamics, water waves, fluid mechanics, mathematical biology, and moving boundary problems. He is widely recognised for his contributions to modelling complex free-boundary phenomena, including thin-film rupture, Hele–Shaw flows, and biological invasion processes.

Abstract

We apply techniques of exponential asymptotics to the KdV equation to derive the small-time behaviour for dispersive waves that propagate in one direction.  The results demonstrate how the amplitude, wavelength and speed of these waves depend on the strength and location of complex-plane singularities of the initial condition.  Using matched asymptotic expansions, we show how the small-time dynamics of complex singularities of the time-dependent solution are dictated by a Painlevé II problem with decreasing tritronquée solutions.  We relate these dynamics to the solution on the real line.

 

 

Wed, 03 Sep 2025
15:00
L3

Integrating lab experiments into fluid dynamics models

Ashleigh Hutchinson
(University of Manchester)
Abstract

In this talk, we will explore three flow configurations that illustrate the behaviour of slow-moving viscous fluids in confined geometries: viscous gravity currents, fracturing of shear-thinning fluids in a Hele-Shaw cell, and rectangular channel flows of non-Newtonian fluids. We will first develop simple mathematical models to describe each setup, and then we will compare the theoretical predictions from these models with laboratory experiments. As is often the case, we will see that even models that are grounded in solid physical principles often fail to accurately predict the real-world flow behaviour. Our aim is to identify the primary physical mechanisms absent from the model using laboratory experiments. We will then refine the mathematical models and see whether better agreement between theory and experiment can be achieved.

 

Thu, 19 Jun 2025

16:00 - 17:00
C1

Unusual transport in odd-diffusive systems

Erik Kalz
(University of Potsdam)
Further Information

Erik Kalz is a PhD student at U Potsdam in the group of Ralf Metzler. The group focuses on nonequilibrium statistical physics and anomalous stochastic processes, with applications to biological and soft matter systems.

Abstract

Odd systems, characterised by broken time-reversal or parity symmetry, 
exhibit striking transport phenomena due to transverse responses. In this 
talk, I will introduce the concept of odd diffusion, a generalisation of 
diffusion in two-dimensional systems that incorporates antisymmetric tensor 
components. Focusing on systems of interacting particles, I adapt a 
geometric approach to derive effective transport equations and show how 
interactions give rise to unusual transport in odd systems. I present 
effects like enhanced self-diffusion, reversed Hall drift and even absolute 
negative mobility that solely originate in odd diffusion. These results 
reveal how microscopic symmetry-breaking gives rise to emergent, equilibrium 
and non-equilibrium transport, with implications for soft matter, chiral 
active systems, and topological materials.

 

Wed, 18 Jun 2025

12:00 - 13:00
L3

Structures and Stability: Battling Beams, Kirigami Computing, and Eye Morphogenesis

Douglas Holmes
(Boston University College of Engineering)
Further Information

Short Bio
Douglas Holmes is a Professor in the Department of Mechanical Engineering at Boston University. He received degrees in Chemistry from the University of New Hampshire (B.S. 2004), Polymer Science & Engineering from the University of Massachusetts, Amherst (M.S. 2005, Ph.D. 2009), and was a postdoctoral researcher in Mechanical & Aerospace Engineering at Princeton University. Prior to joining Boston University, he was an Assistant Professor of Engineering Science & Mechanics at Virginia Tech. His research group specializes in the mechanics of slender structures, with a focus on understanding and controlling how objects change shape. His work has been recognized by the NSF CAREER Award, the ASEE Ferdinand P. Beer and E. Russell Johnston Jr. Outstanding New Mechanics Educator Award, and the Theo de Winter Distinguished Faculty Fellowship.

Abstract

Structural mechanics plays a crucial role in soft matter physics, mechanobiology, metamaterials, pattern formation, active matter, and soft robotics. What unites these seemingly disparate topics is the natural balance that emerges between elasticity, geometry, and stability. This seminar will serve as a high-level overview of our work on several problems concerning the stability of structures. I will cover three topics: (1) shapeshifting shells; (2) mechanical metamaterials; and (3) elastogranular mechanics.


I will begin by discussing our development of a generalized, stimuli-responsive shell theory. (1) Non-mechanical stimuli including heat, swelling, and growth further complicate the nonlinear mechanics of shells, as simultaneously solving multiple field equations to capture multiphysics phenomena requires significant computational expense. We present a general shell theory to account for non-mechanical stimuli, in which the effects of the stimuli are
generalized into three forms: those that add mass to the shell, those that increase the area of the shell through the natural stretch, and those that change the curvature of the shell through the natural curvature. I will show how this model can capture the morphogenesis of the optic cup, the snapping of the Venus flytrap, leaf growth, and the buckling of electrically active polymer plates. (2) I will then discuss how cutting thin sheets and shells, a process
inspired by the art of kirigami, enables the design of functional mechanical metamaterials. We create linear actuators, artificial muscles, soft robotic grippers, and mechanical logic units by systematically cutting and stretching thin sheets. (3) Finally, if time permits, I will introduce our work on the interactions between elastic and granular matter, which we refer to as elastogranular mechanics. Such interactions occur across all lengths, from morphogenesis, to root growth, to stabilizing soil against erosion. We show how combining rocks and string in the absence of any adhesive we can create large, load bearing structures like columns, beams, and arches. I will finish with a general phase diagram for elastogranular behavior.

 

 

Thu, 12 Jun 2025

12:00 - 13:00
L3

Microfluidic model of haemodynamics in complex media

Anne Juel
(University of Manchester)
Further Information

Short Bio
Anna Juel is a physicist whose research explores the complex dynamics of material systems, particularly in two-phase flows and wetting phenomena. Her group focuses on microfluidics, fluid-structure interactions, and complex fluid flows, with applications ranging from chocolate moulding to airway reopening and flexible displays. Based at the Manchester Centre for Nonlinear Dynamics, her experimental work often uncovers surprising behaviour, driving new insights through combined experimentation and modelling.

Abstract
The flow of red blood cells (RBCs) in heterogeneous biological porous tissues such as the human placenta, remains poorly understood despite the essential role the microvasculature plays in maintaining overall health and functionality of tissues, blood flow and transport mechanisms. This is in great part because the usual description of blood as a simple fluid breaks down when the size of RBCs is similar to that of the vessel. In this study, we use a bespoke suspension of ultra-soft microcapsules with a poroelastic membrane, which have been previously shown to mimic the motion and large deformations of RBCs in simple conduits [1], in order to explore soft suspension flows in planar porous media. Our planar porous devices are Hele-Shaw channels, where the capsules are slightly confined within the channel depth, and in which we increase confinement by adding regular or disordered arrays of pillars. We perform experiments that relate the global resistance of the suspension flow through the porous media to the local distributions of capsule concentration and velocity as a function of volume fraction, capillary number Ca, the ratio of viscous to elastic forces, and geometry. We find that the flow patterns in Hele-Shaw channels and ordered porous media differ significantly from those in disordered porous media, where the presence of capsules promotes preferential paths and supports anomalous capsule dispersion. In contrast, the flows in ordered geometries develop intriguing shear-banding patterns as the volume fraction increases. Despite the complex microscopic dynamics of the suspension flow, we observe the emergence of similar scaling laws for the global flow resistance in both regular and disordered porous media as a function of Ca. We find that the scaling exponent decreases with increasing volume fraction because of cooperative capsule mechanisms, which yield relative stiffening of the system for increasing Ca.
 
[1] Chen et al. Soft Matter 19, 5249- 5261.
 
Thu, 05 Jun 2025

12:00 - 13:00
L3

Constitutive Modeling of the Microstructure of Arterial Walls Including Collagen Cross-Linking

Gerhard Holzapfel
(TU Graz)
Further Information

Extended Bio
Gerhard A. Holzapfel is a world-leading figure in biomechanics, currently serving as Professor and Head of the Institute of Biomechanics at Graz University of Technology (TUG), Austria. He also holds appointments as Adjunct Professor at the Norwegian University of Science and Technology (NTNU) in Trondheim and Visiting Professor at the University of Glasgow. From 2004 to 2013, he was Professor of Biomechanics at the Royal Institute of Technology (KTH) in Stockholm.

Following a PhD in Mechanical Engineering from Graz, Professor Holzapfel was awarded an Erwin Schrödinger Scholarship, enabling him to conduct research at Stanford University. He achieved his Habilitation at TU Vienna in 1996 and was the recipient of Austria’s prestigious START Award in 1997. Over subsequent decades, he has led pioneering work in computational biomechanics, including as Head of the Computational Biomechanics research group at TUG (1998–2004).

Professor Holzapfel has received numerous accolades, including the Erwin Schrödinger Prize of the Austrian Academy of Sciences (2011), listings among “The World’s Most Influential Scientific Minds” (Thomson Reuters, 2014), the William Prager Medal and Warner T. Koiter Medal (2021), an honorary doctorate from École des Mines de Saint-Étienne (2024), and election to the U.S. National Academy of Engineering (2025). In 2024, he was awarded a prestigious Synergy Grant from the European Research Council (ERC).

His research spans experimental and computational biomechanics and mechanobiology, with a particular focus on soft biological tissues and the cardiovascular system in both health and disease. His expertise includes nonlinear continuum mechanics, constitutive modelling, growth and remodeling, imaging and image-based modeling, and the mechanics of therapeutic interventions such as angioplasty and stenting.

Professor Holzapfel is the author of the widely adopted graduate textbook Nonlinear Solid Mechanics (Wiley), has co-edited seven additional books, and contributed chapters to over 30 volumes. He has published more than 300 peer-reviewed journal articles. He is also the co-founder and co-editor of the journal Biomechanics and Modeling in Mechanobiology (Springer). His work has been funded by numerous national and international agencies, including the Austrian Science Fund, NIH, the European Commission, and industry collaborators.

Abstract

Nowadays, the 3D ultrastructure of a fibrous tissue can be reconstructed in order to visualize the complex nanoscale arrangement of collagen fibrils including neighboring proteoglycans even in the stretched loaded state [1]. In particular, experimental data of collagen fibers in human artery layers have shown that the f ibers are not symmetrically dispersed [2]. In addition, it is known that collagen f ibers are cross-linked and the density of cross-links in arterial tissues has a stiffening effect on the associated mechanical response. A first attempt to characterize this effect on the elastic response is presented and the influence of the cross-link density on the mechanical behavior in uniaxial tension is shown [3]. A recently developed extension of the model that accounts for dispersed fibers connected by randomly distributed cross-links is outlined [4]. A simple shear test focusing on the sign of the normal stress perpendicular to the shear planes (Poynting effect) is analyzed. In [5] it was experimentally observed that, in contrast to rubber, semi-flexible biopolymer gels show a tendency to approach the top and bottom faces under simple shear. This so-called negative Poynting effect and its connection with the cross-links as well as the fiber and crosslink dispersion is also examined. 

References 

[1]A. Pukaluk et al.: An ultrastructural 3D reconstruction method for observing the arrangement of collagen fibrils and proteoglycans in the human aortic wall under mechanical load. Acta Biomaterialia, 141:300-314, 2022. 

 [2] G.A. Holzapfel et al.: Modelling non-symmetric collagen fibre dispersion in arterial walls. Journal of the Royal Society Interface, 12:20150188, 2015. 

 [3] G.A. Holzapfel and R.W. Ogden: An arterial constitutive model accounting for collagen content and cross-linking. Journal of the Mechanics and Physics of Solids, 136:103682, 2020. 

 [4] S. Teichtmeister and G.A. Holzapfel: A constitutive model for fibrous tissues with cross-linked collagen fibers including dispersion – with an analysis of the Poynting effect. Journal of the Mechanics and Physics of Solids, 164:104911, 2022. 

[5] P.A. Janmey et al.: Negative normal stress in semiflexible biopolymer gels. Nature Materials, 6:48–51, 2007.

 

Thu, 29 May 2025

12:00 - 13:00
L3

Pressure-driven fracture in elastic continuum materials

Peter Stewart
(University of Glasgow)
Further Information

Short Bio
Peter S. Stewart is a Professor of Applied Mathematics at the University of Glasgow. His research applies continuum mechanics to physiological and industrial problems. He previously held postdoctoral positions at the University of Oxford and Northwestern University, and earned his PhD from the University of Nottingham with a thesis on flows in flexible channels and airways. http://www.maths.gla.ac.uk/~pstewart

Abstract
Experiments indicate that a monolayer of gas-liquid foam confined within a Hele-Shaw cell can exhibit brittle fracture when subject to an applied driving pressure. In this talk we characterise this brittle fracture mode by considering the propagation of an internally pressurised crack though a slab of elastic continuum material with low resistance to shear, extending the classical description of pressure-driven fracture in a linearly elastic material to a slab of finite-width. We employ a novel matched eigenfunction expansion approach to formulate the stress field, incorporating a global penalty term which we isolate by solving a Fredholm integral equation. We recover the well-known stress singularity in the neighbourhood of the crack tip, but demonstrate that the spatial extent of this stress field in the direction of the crack is set by the domain width irrespective of the shear modulus of the material. The versatility of this approach allows for considerable modifications in the physical properties of the fracturing material, including those characteristic of foams, where out-of-plane deflection of the structural elements and accompanying viscous resistance to motion over the plates of the Hele-Shaw cell are important. These modifications facilitate a solution of the continuum model in the limit of zero shear modulus, where the stress singularity is entirely absent and the lengthscale of the stress-field in the direction of the crack is instead set by the dissipation coefficients. We exploit this mis-match in lengthscales to construct an asymptotic description for a slender domain, analytically characterising the critical conditions for crack propagation as a function of the driving pressure and the domain width. Furthermore, we show that this outer asymptotic solution can be extended to describe materials with low but finite shear modulus, where the accompanying stress singularity around the crack tip is confined within a boundary layer adjacent to the crack surface.
 
 
 
 
Thu, 22 May 2025

12:00 - 13:00
L3

Accelerating Predictions of Turbulent Combustion and Nonequilibrium Flows Using Solver-Embedded Deep Learning

Jonathan MacArt
(Univ. of Notre Dame)
Further Information

Short Bio
Jonathan MacArt leads the Reacting Turbulence Lab, where he and his team develop high-performance computational tools to study how flow physics interact with phenomena like chemical heat release and plasma kinetics. Their work includes large-scale DNS, LES, RANS simulations, and physics-informed machine learning, with applications ranging from gas turbines to hypersonic propulsion systems.

Abstract

Predictions of complex flows remain a significant challenge for engineering systems. Computationally affordable predictions of turbulent flows generally require Reynolds-Averaged Navier–Stokes (RANS) simulations and Large-Eddy Simulation (LES), the predictive accuracy of which can be insufficient due to non-Boussinesq turbulence and/or unresolved multiphysics that preclude qualitative fidelity in certain regimes. For example, in turbulent combustion, flame–turbulence interactions can lead to inverse-cascade energy transfer, which violates the assumptions of many RANS and LES closures. We present an adjoint-based, solver-embedded data assimilation method to augment the RANS and LES equations using trusted data. This is accomplished using Python-native flow solvers that leverage differentiable programming techniques to construct the adjoint equations needed for optimization. We present applications to shock-tube ignition delay predictions, turbulent premixed jet flames, and shock-dominated nonequilibrium flows and discuss the potential of adjoint-based approaches for future machine learning applications.

 

Thu, 08 May 2025

12:00 - 13:00
L3

Low-rank methods for discovering structure in data tensors in neuroscience

Alex Cayco-Gajic
(École Normale Supérieure Paris)
Further Information

Short Bio

Alex Cayco Gajic is a Junior Professor in the Department of Cognitive Studies at ENS, with a background in applied mathematics and a PhD from the University of Washington. Her research bridges computational modelling and data analysis to study cerebellar function, exploring its roles beyond motor control in collaboration with experimental neuroscientists.

Abstract

A fundamental question in neuroscience is to understand how information is represented in the activity of  tens of thousands of neurons in the brain. Towards this end, low-rank matrix and tensor decompositions are commonly used to identify correlates of behavior in high-dimensional neural data. In this talk I will first present a novel tensor decomposition based on the slice rank which is able to disentangle mixed modes of covarying patterns in data tensors. Second, to compliment this statistical approach, I will present our recent dynamical systems modelling of neural activity over learning. Rather than factorizing data tensors themselves, we instead fit a dynamical system to the data, while constraining the tensor of parameters to be low rank. Together these projects highlight how applications in neural data can inspire new classes of low-rank models.

Thu, 01 May 2025

12:00 - 13:00
L3

Do Plants Know Math?: Adventures of a Mathematician in Science Writing

Christophe Golé
(Smith College)
Further Information

Short Bio
Christophe Golé is a mathematician originally from France, with academic positions held at institutions including ETH Zurich and UC Santa Cruz. He is the author of Symplectic Twist Maps, a book on dynamical systems, and coined the term “ghost tori” in this context. His recent work focuses on mathematical biology, particularly plant pattern formation (phyllotaxis) and the occurrence of Fibonacci numbers in nature. He co-founded the NSF-funded 4 College Biomath Consortium, which led to the Five College Biomathematical Sciences Certificate Program.

Abstract

"Do Plants Know Math?" is the title of a book I co-authored with physicist Stéphane Douady, biologist Jacques Dumais, and writer Nancy Pick. Written for a general audience with a historical perspective, the book primarily explores phyllotaxis—the arrangement of leaves and other organs around plant stems—while also examining plant fractals, kirigami models of leaf formation, and related phenomena.

To our knowledge, phyllotaxis represents the first historical intersection of biological and mathematical research. Delving into its history uncovers remarkable treasures: phyllotaxis studies led to the first formulation of renormalization (van Iterson, 1907) and inspired one of the earliest computer programs (developed by Turing in the last years of his life).

In this talk, I will highlight several of these hidden historical gems while discussing the productive symbiosis between our scientific research on phyllotaxis and the creation of our book.

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Thu, 13 Mar 2025

12:00 - 13:00
L3

Some methods for finding vortex equilibria

Robb McDonald
(UCL)
Further Information

Robb McDonald is a Professor in the Department of Mathematics. His research falls into two areas: 

(i) geophysical fluid dynamics, including rotating stratified flows, rotating hydraulics, coastal outflows, geophysical vortices and topographic effects on geophysical flows.
(ii) complex variable methods applied to 2D free-boundary problems. This includes vortex dynamics, Loewner evolution, Hele-Shaw flows and Laplacian growth, industrial coating problems, and pattern formation in nature.

 

Abstract

Determining stationary compact configurations of vorticity described by the 2D Euler equations is a classic problem dating back to the late 19th century. The aim is to find equilibrium distributions of vorticity, in the form  of point vortices, vortex sheets, vortex patches, and hollow vortices. This endeavour has driven the development of mathematical and numerical techniques such as Hamiltonian vortex dynamics and contour dynamics.

In the case of vortex sheets, methods and results are presented for finding rotating equilibria, some in the presence of point vortices. To begin, a numerical approach based on that recently developed by Trefethen, Costa, Baddoo, and others for solving Laplace's equation in the complex plane by series and rational approximation is described. The method successfully reproduces the exact vortex sheet solutions found by O'Neil (2018) and Protas & Sakajo (2020). Some new solutions are found.

The numerical approach suggests an analytical method based on conformal mapping for finding exact closed-form vortex sheet equilibria. Examples are presented.

Finally, new numerical solutions are computed for steady, doubly-connected vortex layers of uniform vorticity surrounding a solid object such that the fluid velocity vanishes on the outer free boundary. While dynamically unrelated, these solutions have mathematical analogy and application to the industrial free boundary problem arising in the dip-coating of objects by a viscous fluid.

 

Thu, 27 Feb 2025

12:00 - 13:00
L2

Coarse-grained models for schooling swimmers in fast flows

Anand Oza
(New Jersey Institute of Technology)
Further Information

Anand Oza is Associate Professor in the Department of Mathematical Sciences as a part of the Complex Flows and Soft Matter (CFSM) Group. He is interested in fluid mechanics and nonlinear dynamics, with applications to soft matter physics and biology. His research utilizes a combination of analytical techniques and numerical simulations, collaborating with experimentalists whenever possible.

Abstract

The beautiful displays exhibited by fish schools and bird flocks have long fascinated scientists, but the role of their complex behavior remains largely unknown. In particular, the influence of hydrodynamic interactions on schooling and flocking has been the subject of debate in the scientific literature. I will present a model for flapping wings that interact hydrodynamically in an inviscid fluid, wherein each wing is represented as a plate that executes a prescribed time-periodic kinematics. The model generalizes and extends thin-airfoil theory by assuming that the flapping amplitude is small, and permits consideration of multiple wings through the use of conformal maps and multiply-connected function theory. We find that the model predictions agree well with experimental data on freely-translating, flapping wings in a water tank. The results are then used to motivate a reduced-order model for the temporally nonlocal interactions between schooling wings, which consists of a system of nonlinear delay-differential equations. We obtain a PDE as the mean-field limit of these equations, which we find supports traveling wave solutions. Generally, our results indicate how hydrodynamics may mediate schooling and flocking behavior in biological contexts.

 

Thu, 20 Feb 2025

12:00 - 13:00
L3

Advanced Effective Models in Elasticity

Claire Lestringant
(Sorbonne University)
Further Information

Dr Claire Lestringant explores new models for understanding the mechanics of thin structures under large deformations, used for example to understand morphogenesis in biological systems or for the design of multi-stable, reconfigurable space structures. She received a PhD in Mechanics from Université Pierre et Marie Curie in 2017 and worked as a post-doc in D. Kochmann’s group at ETH Zurich in Switzerland.

Abstract

I will discuss two classes of effective, macroscopic models in elasticity: (i) 1D models applicable to thin structures, and (ii) homogenized 2D or 3D continua applicable to materials with a periodic microstructure. In both systems, the separation of scales calls for the definition of macroscopic models that slave fine-scale fluctuations to an effective, macroscopic deformation field. I will show how such models can be established in a systematic and rigorous way based on a two-scale expansion that accounts for nonlinear and higher-order (i.e. deformation gradient) effects. I will further demonstrate that the resulting models accurately predict nonlinear effects, finite size effects and localization for a set of examples. Finally, I will discuss two challenges that arise when solving these effective models: (1) missed boundary layer effects and (2) negative stiffness associated with higher-order terms.

Thu, 13 Feb 2025

12:00 - 13:00
L3

Various

Various Speakers from OCIAM Year 2 Graduates
(Mathematical Institute)
Thu, 13 Feb 2025
12:00
L3

OCIAM TBC

OCIAM TBC
Thu, 06 Feb 2025

12:00 - 13:00
L3

Modelling flying formations and vortex ring motions

Christiana Mavroyiakoumou
(Courant Institute of Mathematical Sciences)
Further Information

Christiana is an Assistant Professor at the Courant Institute of Mathematical Sciences (New York University) working in the Applied Math Lab, primarily with Leif Ristroph and Jun Zhang. Her interests are in using modeling, numerical simulations, and experiments to study fluid dynamical problems, with an emphasis on fluid-structure interactions.

Currently Christiana is working on understanding the role of flow interactions in flying bird formations and the hydrodynamics of swimming fish.

Abstract

We consider two problems in fluid dynamics: the collective locomotion of flying animals and the interaction of vortex rings with fluid interfaces. First, we present a model of formation flight, viewing the group as a material whose properties arise from the flow-mediated interactions among its members. This aerodynamic model explains how flapping flyers produce vortex wakes and how they are influenced by the wakes of others. Long in-line arrays show that the group behaves as a soft, excitable "crystal" with regularly ordered member "atoms" whose positioning is susceptible to deformations and dynamical instabilities. Second, we delve into the phenomenon of vortex ring reflections at water-air interfaces. Experimental observations reveal reflections analogous to total internal reflection of a light beam. We present a vortex-pair--vortex-sheet model to simulate this phenomenon, offering insights into the fundamental interactions of vortex rings with free surfaces.

Thu, 30 Jan 2025

12:00 - 13:00
L3

Spontaneous shape transformations of active surfaces

Alexander Mietke
(Department of Physics)
Further Information

Alexander Mietke is a theoretical physicist working on active and living matter. He frequently collaborates with experimentalists who study processes at the cell, tissue and organism scale to identify minimal physical principles that guide these processes. This often inspires new theoretical work on topics in non-equilibrium soft matter physics, more broadly in the self-organization of mechanical and chemical patterns in active matter, the emergent shape dynamics of membranes and active surfaces, liquid crystals in complex geometries, chirality in active systems, as well as in developing coarse-graining and inference approaches that are directly applicable to experimental data. 

Abstract

Biological matter has the fascinating ability to autonomously generate material deformations via intrinsic active forces, where the latter are often present within effectively two-dimensional structures. The dynamics of such “active surfaces” inevitably entails a complex, self-organized interplay between geometry of a surface and its mechanical interactions with the surrounding. The impact of these factors on the self-organization capacity of surfaces made of an active material, and how related effects are exploited in biological systems, is largely unknown.

In this talk, I will first discuss general numerical challenges in analysing self-organising active surfaces and the bifurcation structure of emergent shape spaces. I will then focus on active surfaces with broken up-down symmetry, of which the eukaryotic cell cortex and epithelial tissues are highly abundant biological examples. In such surfaces, a natural interplay arises between active stresses and surface curvature. We demonstrate that this interplay leads to a comprehensive library of spontaneous shape transformations that resemble stereotypical morphogenetic processes. These include cell-division-like invaginations and the autonomous formation of tubular surfaces of arbitrary length, both of which robustly overcome well-known shape instabilities that would arise in analogue passive systems.

 

 

Thu, 23 Jan 2025

12:00 - 13:00
L3

Optimal design of odd active solids

Anton Souslov
(University of Cambridge)
Further Information

Anton Souslov is an Associate Professor of Theoretical Statistical Physics working on the theory of soft materials, including mechanical metamaterials, active matter, topological states, and polymer physics.

Abstract

Active solids consume energy to allow for actuation and shape change not possible in equilibrium. I will first introduce active solids in comparison with their active fluid counterparts. I will then focus on active solids composed of non-reciprocal springs and show how so-called odd elastic moduli arise in these materials. Odd active solids have counter-intuitive elastic properties and require new design principles for optimal response. For example, in floppy lattices, zero modes couple to microscopic non-reciprocity, which destroys odd moduli entirely in a phenomenon reminiscent of rigidity percolation. Instead, an optimal odd lattice will be sufficiently soft to activate elastic deformations, but not too soft. These results provide a theoretical underpinning for recent experiments and point to the design of novel soft machines.

 

 

Thu, 05 Dec 2024

12:00 - 13:00
L3

Chaotic flows in polymer solutions: what’s new?

Prof. Rich Kerswell
(University of Cambridge)
Further Information

Rich Kerswell is a professor in the Department of Applied Mathematics and Theoretical Physics (DAMTP) at the University of Cambridge. His research focuses on fluid dynamics, particularly in the transition to turbulence, geophysical fluid flows, and nonlinear dynamics. Kerswell is known for studying how simple fluid systems can exhibit complex, chaotic behavior and has contributed to understanding turbulence's onset and sustainment in various contexts, including pipes and planetary atmospheres. His work integrates mathematical modeling, theoretical analysis, and computational simulations to explore instabilities and the fundamental mechanisms governing fluid behavior in nature and industry.

Abstract

It is well known that adding even small amounts of  long chain polymers (e.g. few parts per million) to Newtonian solvents can drastically change the flow behaviour by introducing elasticity. In particular,  two decades ago, experiments in curved geometries  demonstrated  that polymer flows can be  chaotic even at vanishingly small Reynolds numbers. The situation in `straight’ flows  such as pressure-driven flow down a channel is less clear  and hence an area of current focus. I will discuss recent progress.

Thu, 21 Nov 2024

12:00 - 13:00
L3

Tension-induced giant actuation in elastic sheets (Marc Sune) Deciphering Alzheimer's Disease: A Modelling Framework for In Silico Drug Trials (Georgia Brennan)

Dr Marc Suñé & Dr Georgia Brennan
(Mathematical Institute)
Abstract

Tension-induced giant actuation in elastic sheets

Dr. Marc Suñé

Buckling is normally associated with a compressive load applied to a slender structure; from railway tracks in extreme heat to microtubules in cytoplasm, axial compression is relieved by out-of-plane buckling. However, recent studies have demonstrated that tension applied to structured thin sheets leads to transverse motion that may be harnessed for novel applications, such as kirigami grippers, multi-stable `groovy-sheets', and elastic ribbed sheets that close into tubes. Qualitatively similar behaviour has also been observed in simulations of thermalized graphene sheets, where clamping along one edge leads to tilting in the transverse direction. I will discuss how this counter-intuitive behaviour is, in fact, generic for thin sheets that have a relatively low stretching modulus compared to the bending modulus, which allows `giant actuation' with moderate strain.

Thu, 07 Nov 2024

12:00 - 13:00
L3

Translational Applications of Mathematical and Computational Modeling in Respiratory and Critical Care Medicine

Prof. Samir Ghadiali
(Imperial College)
Further Information

Samir Ghadiali is Professor and Chair/Head of the Department of Biomedical Engineering at the Ohio State University (OSU) and a Professor of Pulmonary and Critical Care Medicine at the OSU Wexner Medical Center. Dr. Ghadiali is a Fellow of the American Institute of Medical and Biological Engineering, the Biomedical Engineering Society and is a Parker B. Francis Fellow in Pulmonary Research. He is a member of the Davis Heart & Lung Research Institute and the Biophysics Graduate Program at OSU, and his internationally recognized research program uses biomedical engineering tools to develop novel diagnostic platforms and drug/gene therapies for cardiovascular and respiratory disorders. His research has been funded by the National Science Foundation, National Institutes of Health, the American Heart Association, and the United States Department of Defense and he has mentored over 35 pre-doctoral and post-doctoral trainees who have gone on to successful academic, industrial and research careers. 

Abstract

The global COVID19 pandemic has highlighted the lethality and morbidity associated with infectious respiratory diseases. These diseases can lead to devastating syndrome known as the acute respiratory distress syndrome (ARDS) where bacterial/viral infections cause excessive lung inflammation, pulmonary edema, and severe hypoxemia (shortness of breath). Although ARDS patients require artificial mechanical ventilation, the complex biofluid and biomechanical forces generated by the ventilator exacerbates lung injury leading to high mortality. My group has used mathematical and computational modeling to both characterize the complex mechanics of lung injury during ventilation and to identify novel ways to prevent injury at the cellular level. We have used in-vitro and in-vivo studies to validate our mathematical predictions and have used engineering tools to understand the biological consequences of the mechanical forces generated during ventilation. In this talk I will specifically describe how our mathematical/computational approach has led to novel cytoskeletal based therapies and how coupling mathematics and molecular biology has led to the discovery of a gene regulatory mechanisms that can minimize ventilation induced lung injury. I will also describe how we are currently using nanotechnology and gene/drug delivery systems to enhance the lung’s native regulatory responses and thereby prevent lung injury during ARDS.

Thu, 31 Oct 2024

12:00 - 13:00
L3

Volcanic fissure localisation and lava delta formation: Modelling of volcanic flows undergoing rheological evolution

Jesse Taylor-West
(University of Bristol)
Abstract
In this talk, I will present two volcanologically motivated modelling problems.  In the first, I will detail how thermoviscous localisation of volcanic eruptions is influenced by the irregular geometry of natural volcanic fissures. Fissure eruptions typically start with the opening of a linear fissure that erupts along its entire length, following which activity localises to one or more isolated vents within a few hours or days. Previous work has proposed that localisation can arise through a thermoviscous fingering instability driven by the strongly temperature dependent viscosity of the rising magma. I will show that, even for relatively modest variations of the fissure width, a non-planar geometry supports strongly localised steady states, in which the wider parts of the fissure host faster, hotter flow, and the narrower parts of the fissure host slower, cooler flow. This geometrically-driven localisation is different from, and typically more potent than, the thermoviscous fingering localisation observed in planar geometries.  
 
The second problem concerns lava delta formation. A lava delta arises when a volcanic lava flow enters a body of water, extending the pre-eruption shoreline via the creation of new, flat land. A combination of cooling induced rheological changes and the reduction in gravitational driving forces controls the morphology and evolution of the delta. I will present shallow-layer continuum models for this process, highlighting how different modes of delta formation manifest in different late-time behaviours.
Thu, 24 Oct 2024

12:00 - 13:00
L3

Effective elasticity and dynamics of helical filaments under distributed loads

Michael Gomez
(Kings College London)
Abstract

Slender elastic filaments with intrinsic helical geometry are encountered in a wide range of physical and biological settings, ranging from coil springs in engineering to bacteria flagellar filaments. The equilibrium configurations of helical filaments under a variety of loading types have been well studied in the framework of the Kirchhoff rod equations. These equations are geometrically nonlinear and so can account for large, global displacements of the rod. This geometric nonlinearity also makes a mathematical analysis of the rod equations extremely difficult, so that much is still unknown about the dynamic behaviour of helical rods under external loading.

An important class of simplified models consists of 'equivalent-column' theories. These model the helical filament as a naturally-straight beam (aligned with the helix axis) for which the extensional and torsional deformations are coupled. Such theories have long been used in engineering to describe the free vibrations of helical coil springs, though their validity remains unclear, particularly when distributed forces and moments are present. In this talk, we show how such an effective theory can be derived systematically from the Kirchhoff rod equations using the method of multiple scales. Importantly, our analysis is asymptotically exact in the small-wavelength limit and can account for large, unsteady displacements. We then illustrate our theory with two loading scenarios: (i) a heavy helical rod deforming under its own weight; and (ii) axial rotation (twirling) in viscous fluid, which may be considered as a simple model for a bacteria flagellar filament. More broadly, our analysis provides a framework to develop reduced models of helical rods in a wide variety of physical and biological settings, as well as yielding analytical insight into their tensile instabilities.

Thu, 17 Oct 2024

12:00 - 13:00
L3

Microswimmer motility and natural robustness in pattern formation: the emergence and explanation of non-standard multiscale phenomena

Mohit Dalwadi
(Mathematical Institute)
Abstract
In this talk I use applied mathematics to understand emergent multiscale phenomena arising in two fundamental problems in fluids and biology.
 
In the first part, I discuss an overarching question in developmental biology: how is it that cells are able to decode spatio-temporally varying signals into functionally robust patterns in the presence of confounding effects caused by unpredictable or heterogeneous environments? This is linked to the general idea first explored by Alan Turing in the 1950s. I present a general theory of pattern formation in the presence of spatio-temporal input variations, and use multiscale mathematics to show how biological systems can generate non-standard dynamic robustness for 'free' over physiologically relevant timescales. This work also has applications in pattern formation more generally.
 
In the second part, I investigate how the rapid motion of 3D microswimmers affects their emergent trajectories in shear flow. This is an active version of the classic fluid mechanics result of Jeffery's orbits for inert spheroids, first explored by George Jeffery in the 1920s. I show that the rapid short-scale motion exhibited by many microswimmers can have a significant effect on longer-scale trajectories, despite the common neglect of this motion in some mathematical models, and how to systematically incorporate this effect into modified versions of Jeffery's original equations.
Thu, 13 Jun 2024

12:00 - 13:00
L3

The mechanics of physical knots: from shoelaces to surgical sutures

Pedro M. Reis
(EPFL)
Further Information

 

Pedro M. Reis

Flexible Structures Laboratory, 

Institute of Mechanical Engineering,

Ecole Polytechnique Fédérale de Lausanne (EPFL), 

Pedro Miguel Reis is a Professor of Mechanical Engineering at the École Polytechnique Fédérale de Lausanne (EPFL) in Switzerland. Prof. Reis received a B.Sc. in Physics from the University of Manchester, UK (1999), a Certificate of Advanced Studies in Mathematics (Part III Maths) from St. John’s College and DAMTP, University of Cambridge (2000), and a Ph.D. in physics from the University of Manchester (2004). He was a postdoc at the City College of New York (2004-2005) and at the CNRS/ESPCI in Paris (2005-2007). He joined MIT in 2007 as an Instructor in Applied Mathematics. In 2010, he moved to MIT’s School of Engineering, with dual appointments in Mechanical Engineering and Civil & Environmental Engineering, first as the Esther and Harold E. Edgerton Assistant Professor and, after 2014, as Gilbert W. Winslow Associate Professor. In October 2013, the Popular Science magazine named Prof. Reis to its 2013 “Brilliant 10” list of young stars in Science and Technology. In 2021, he was the President of the Society of Engineering Science (SES). Prof. Reis has also received the 2014 CAREER Award (NSF), the 2016 Thomas J.R. Hughes Young Investigator Award (Applied Mechanics Division of the ASME), the 2016 GSOFT Early Career Award for Soft Matter Research (APS), and he is a Fellow of the American Physical Society (APS).

Abstract

Even though most of us tie our shoelaces "wrongly," knots in ropes and filaments have been used as functional structures for millennia, from sailing and climbing to dewing and surgery. However, knowledge of the mechanics of physical knots is largely empirical, and there is much need for physics-based predictive models. Tight knots exhibit highly nonlinear and coupled behavior due to their intricate 3D geometry, large deformations, self-contact, friction, and even elasto-plasticity. Additionally, tight knots do not show separation of the relevant length scales, preventing the use of centerline-based rod models. In this talk, I will present an overview of recent work from our research group, combining precision experiments, Finite Element simulations, and theoretical analyses. First, we study the mechanics of two elastic fibers in frictional contact. Second, we explore several different knotted structures, including the overhand, figure-8, clove-hitch, and bowline knots. These knots serve various functions in practical settings, from shoelaces to climbing and sailing. Lastly, we focus on surgical knots, with a particularly high risk of failure in clinical settingsincluding complications such as massive bleeding or the unraveling of high-tension closures. Our research reveals a striking and robust power law, with a general exponent, between the mechanical strength of surgical knots, the applied pre-tension, and the number of throws, providing new insights into their operational and safety limits. These findings could have potential applications in the training of surgeons and enhanced control of robotic-assisted surgical devices.

 

Thu, 06 Jun 2024

12:00 - 13:00
L3

Isolating internal waves using on-the-fly Lagrangian filtering in numerical simulations

Lois Baker
(University of Edinburgh, School of Mathematics)
Further Information

Dr Lois Baker is the Flora Philip Fellow and EPSRC National Fellow in Fluid Dynamicsa in the School of Mathematics at the University of Edinburgh. Her research involves using mathematical and numerical models to understand oceanic fluid dynamics. Baker is particularly interested in the interactions of internal waves and submesoscale vortices that are generated in the deep and upper ocean.

Abstract

 

In geophysical and astrophysical flows, we are often interested in understanding the impact of internal waves on the non-wavelike flow. For example, oceanic internal waves generated at the surface and the seafloor transfer energy from the large scale flow to dissipative scales, thereby influencing the global ocean state. A primary challenge in the study of wave-flow interactions is how to separate these processes – since waves and non-wavelike flows can vary on similar spatial and temporal scales in the Eulerian frame. However, in a Lagrangian flow-following frame, temporal filtering offers a convenient way to isolate waves. Here, I will discuss a recently developed method for evolving Lagrangian mean fields alongside the governing equations in a numerical simulation, and extend this theory to allow effective filtering of waves from non-wavelike processes.

 

Thu, 30 May 2024

12:00 - 13:00
L3

Patterned illumination for complex spatio-temporal morphing of LCE sheets

John Biggins
(University of Cambridge)
Further Information

Biography

John Biggins read natural sciences at Cambridge University. He specialized in experimental and theoretical physics, and was the top ranked student in his cohort. He then did a PhD in the theory of condensed matter group under the supervision of Prof Mark Warner FRS, working on the exotic elasticity of a new phase of soft matter known as a liquid crystal elastomer (LCE). During his PhD he made an extended visit to Caltech to work with Prof Kaushik Bhattacharya on analogies between LCEs and shape memory alloys.

After his PhD, John won an 1851 Royal Commission Fellowship and traveled to Harvard to work with Prof L. Mahadevan on instabilities in soft solids and biological tissues, including creasing, fingering and brain folding. He then returned to Cambridge, first as Walter Scott Research Fellow at Trinity Hall and then as an early career lecturer in the tcm group at the Cavendish Laboratory. During this time, he explained the viral youtube phenomena of the chain fountain, and explored how surface tension can sculpt soft solids, leading to a solid analogue of the Plateau–Rayleigh instability. He also taught first year oscillations, and a third year course "theoretical physics 1."

In 2017, John was appointed to an Assistant Professorship of applied mechanics in Cambridge Engineering Department, where he teaches mechanics and variational methods. In 2019 he won a UKRI Future Leaders Fellowship on "Liquid Crystal Elastomers, from new materials via new mechanics to new machines." This grant added an exciting experimental component to the group, and underpins our current focus on using LCEs as artificial muscles in soft mechanical devices.

 

from http://www.eng.cam.ac.uk/profiles/jsb56 

Abstract

Liquid crystal elastomers are rubbery solids containing molecular LC rods that align along a common director. On heating, the alignment is disrupted, leading to a substantial (~50%) contraction along the director.  In recent years, there has been a great deal of interest in fabrication LCE sheets with a bespoke alignment pattern. On heating, these patterns generate  corresponding patterns of contraction that can morph a sheet into a bespoke curved surface such as a cone or face. Moreover, LCEs can also be activated by light, either photothermally or photochemically, leading to similarly large contractions. Stimulation by light also introduces an important new possibility: using spatio-temporal patterns of illumination to morph a single LCE sample into a range of different surfaces. Such stimulation can enable non-reciprocal actuation for viscous swimming or pumping, and control over the whole path taken by the sheet through shape-space rather than just the final destination. In this talk, I will start by with an experimental example of a spatio-temporal pattern of illumination being used to actuate an LCE peristaltic pump. I will then introduce a second set of experiments, in which a monodomain sheet morphs first into a cone, an anti-cone and then an array of cones upon exposure to different patterns of illumination. Finally, I will then discuss the general problem of how to choose a pattern of illumination to morph a director-patterned sheet into an arbitrary surface, first analytically for axisymmetric cases, then numerically for low symmetry cases. This last study exceeds our current experimental capacity, but highlights how, with full spatio-temporal control over the stimulation magnitude, one can choreograph an LCE sheet to undergo almost any pattern of morphing.

Thu, 23 May 2024

12:00 - 13:00
L3

Mathematical models for biological cooperation: lessons from bacteria

Maria Tatulea-Codrean
(University of Cambridge)
Further Information

Maria is a member of the Biological Fluid Mechanics group. Her current research interests revolve around the themes of flows (flows around and in between filaments, flows in membranes), motors (in particular, bacterial flagellar motors) and oscillators (synchronization of coupled non-linear oscillators, and biological rhythms more broadly).

Abstract
 
Cooperation occurs at all scales in the natural world, from the cooperative binding of ligands on
the molecular scale, to the coordinated migration of animals across continents. To understand
the key principles and mechanisms underlying cooperative behaviours, researchers tend to
focus on understanding a small selection of model organisms. In this talk, we will look through a
mathematician’s lens at one of the most well-studied model organisms in biology—the multiflagellated bacterium Escherichia coli.
 
First, we will introduce the basic features of swimming at the microscopic scale, both biological
(the flagellum) and mathematical (the Stokes equations). Then, we will describe two recent
theoretical developments on the cooperative dynamics of bacterial flagella: an
elastohydrodynamic mechanism that enables independent bacterial flagella to coordinate their
rotation, and a load-sharing mechanism through which multiple flagellar motors split the
burden of torque generation in a swimming bacterium. These results are built on a foundation of
classical asymptotic approaches (e.g., multiple-scale analysis) and prominent mathematical
models (e.g., Adler’s equation) that will be familiar to mathematicians working in many areas of

applied mathematics.

Thu, 16 May 2024

12:00 - 13:00
L3

Modelling liquid infiltration in a porous medium: perils of oversimplification

​Doireann O'Kiely
(University of Limerick)
Abstract

Mathematical modelling can support decontamination processes in a variety of ways.  In this talk, we focus on the contamination step: understanding how much of a chemical spill has seeped into the Earth or a building material, and how far it has travelled, are essential for making good decisions about how to clean it up.  

We consider an infiltration problem in which a chemical is poured on an initially unsaturated porous medium, and seeps into it via capillary action. Capillarity-driven flow through partially-saturated porous media is often modelled using Richards’ equation, which is a simplification of the Buckingham-Darcy equation in the limit where the infiltrating phase is much more viscous than the receding phase.  In this talk, I will explore the limitations of Richards equation, and discuss some scenarios in which predictions for small-but-finite viscosity ratios are very different to the Richards simplification.

Thu, 09 May 2024

12:00 - 13:00
L1

Models of viscous anisotropy

Daniel Richards
(University of Tasmania)
Abstract

What do fiber polymers and ice sheets have in common? They both flow with a directionally dependent - anisotropic - viscosity. This behaviour occurs in other geophysical flows, such as the Earth's mantle, where a material's microstructure affects its large-scale flow. In ice, the alignment of crystal orientations can cause the viscosity to vary by an order of magnitude, consequently having a strong impact on the flow of ice sheets and glaciers. However, the effect of anisotropy on large-scale flow is not well understood, due to a lack of understanding of a) the best physical approximations to model crystal orientations, and b) how crystal orientations affect rheology. In this work, we aim to address both these questions by linking rheology to crystal orientation predictions, and testing a range of models against observations from the Greenland ice sheet. The results show assuming all grains experience approximately the same stress provides realistic predictions, and we suggest a set of equations and parameters which can be used in large-scale models of ice sheets. 

Thu, 02 May 2024

12:00 - 13:00
L3

Path integral formulation of stochastic processes

Steve Fitzgerald
(University of Leeds)
Abstract

Traditionally, stochastic processes are modelled one of two ways: a continuum Fokker-Planck approach, where a PDE is solved to determine the time evolution of the probability density, or a Langevin approach, where the SDE describing the system is sampled, and multiple simulations are used to collect statistics. There is also a third way: the functional or path integral. Originally developed by Wiener in the 1920s to model Brownian motion, path integrals were famously applied to quantum mechanics by Feynman in the 1950s. However, they also have much to offer classical stochastic processes (and statistical physics).  

In this talk I will introduce the formalism at a physicist’s level of rigour, and focus on determining the dominant contribution to the path integral when the noise is weak. There exists a remarkable correspondence between the most-probable stochastic paths and Hamiltonian dynamics in an effective potential [1,2,3]. I will then discuss some applications, including reaction pathways conditioned on finite time [2]. We demonstrate that the most probable pathway at a finite time may be very different from the usual minimum energy path used to calculate the average reaction rate. If time permits, I will also discuss the extremely nonlinear crystal dislocation response to applied stress [4].  

[1] Ge, Hao, and Hong Qian. Int. J. Mod. Phys. B 26.24 1230012 (2012)     

[2] Fitzgerald, Steve, et al. J. Chem. Phys. 158.12 (2023).

[3] Honour, Tom and Fitzgerald, Steve. in press J. Phys. A (2024)

[4] Fitzgerald, Steve. Sci. Rep. 6 (1) 39708 (2016)

 

Thu, 25 Apr 2024

12:00 - 13:00
L3

Static friction models, buckling and lift-off for a rod deforming on a cylinder

Rehan Shah
(Queen Mary, University of London)
Further Information

Dr. Rehan Shah, Lecturer (Assistant Professor) in Mathematics and Engineering Education, Queen Mary University of London

Abstract

We develop a comprehensive geometrically-exact theory for an end-loaded elastic rod constrained to deform on a cylindrical surface. By viewing the rod-cylinder system as a special case of an elastic braid, we are able to obtain all forces and moments imparted by the deforming rod to the cylinder as well as all contact reactions. This framework allows us to give a complete treatment of static friction consistent with force and moment balance. In addition to the commonly considered model of hard frictionless contact, we analyse two friction models in which the rod, possibly with intrinsic curvature, experiences either lateral or tangential friction. As applications of the theory we study buckling of the constrained rod under compressive and torsional loads, finding critical loads to depend on Coulomb-like friction parameters, as well as the tendency of the rod to lift off the cylinder under further loading. The cylinder can also have arbitrary orientation relative to the direction of gravity. The cases of a horizontal and vertical cylinder, with gravity having only a lateral or axial component, are amenable to exact analysis, while numerical results map out the transition in buckling mechanism between the two extremes. Weight has a stabilising effect for near-horizontal cylinders, while for near-vertical cylinders it introduces the possibility of buckling purely due to self-weight. Our results are relevant for many engineering and medical applications in which a slender structure winds inside or outside a cylindrical boundary.


 

Thu, 07 Mar 2024

12:00 - 13:00
L3

Short- and late-time behaviours of Fokker-Planck equations for heterogeneous diffusions

Ralf Blossey
(CNRS & University of Lille, France)
Abstract

The Fokker-Planck equation is one of the major tools of statistical physics in the description of stochastic processes, with numerous applications in physics, chemistry and biology. In the case of heterogeneous diffusions, the formulation of the equation depends on the choice of the discretization of the stochastic integral in the underlying Langevin-equation due to the multiplicative noise. In the Fokker-Planck equation, the choice of discretization then enters as a parameter in the definition of drift and diffusion terms. I show how both short- and long-time limits are affected by this choice. In the long-time limit, the existence of normalizable probability distribution functions is not always guaranteed which can be remedied by invoking elements of infinite ergodic theory. 

[1] S. Giordano, F. Cleri, R. Blossey, Phys Rev E 107, 044111 (2023)

[2] T. Dupont, S. Giordano, F. Cleri, R. Blossey, arXiv:2401.01765 (2024)

Thu, 22 Feb 2024

12:00 - 13:00
L3

Structural identifiability analysis: An important tool in systems modelling

Michael Chappell
(University of Warwick)
Abstract

For many systems (certainly those in biology, medicine and pharmacology) the mathematical models that are generated invariably include state variables that cannot be directly measured and associated model parameters, many of which may be unknown, and which also cannot be measured.  For such systems there is also often limited access for inputs or perturbations. These limitations can cause immense problems when investigating the existence of hidden pathways or attempting to estimate unknown parameters and this can severely hinder model validation. It is therefore highly desirable to have a formal approach to determine what additional inputs and/or measurements are necessary in order to reduce or remove these limitations and permit the derivation of models that can be used for practical purposes with greater confidence.

Structural identifiability arises in the inverse problem of inferring from the known, or assumed, properties of a biomedical or biological system a suitable model structure and estimates for the corresponding rate constants and other model parameters.  Structural identifiability analysis considers the uniqueness of the unknown model parameters from the input-output structure corresponding to proposed experiments to collect data for parameter estimation (under an assumption of the availability of continuous, noise-free observations).  This is an important, but often overlooked, theoretical prerequisite to experiment design, system identification and parameter estimation, since estimates for unidentifiable parameters are effectively meaningless.  If parameter estimates are to be used to inform about intervention or inhibition strategies, or other critical decisions, then it is essential that the parameters be uniquely identifiable. 

Numerous techniques for performing a structural identifiability analysis on linear parametric models exist and this is a well-understood topic.  In comparison, there are relatively few techniques available for nonlinear systems (the Taylor series approach, similarity transformation-based approaches, differential algebra techniques and the more recent observable normal form approach and symmetries approaches) and significant (symbolic) computational problems can arise, even for relatively simple models in applying these techniques.

In this talk an introduction to structural identifiability analysis will be provided demonstrating the application of the techniques available to both linear and nonlinear parameterised systems and to models of (nonlinear mixed effects) population nature.


 
Thu, 08 Feb 2024

12:00 - 13:00
L3

Ocean dynamics on the margin of rotational control

John R Taylor
(University of Cambridge)
Further Information

Professor Taylor's research focuses on the fluid dynamics of the ocean. He is particularly interested in ocean turbulence and mixing, ocean fronts and the surface boundary layer, and the impact of turbulence on micro-organisms. Recent work has uncovered a fascinating and poorly-understood collection of processes occurring at relatively small scales (<O(10km)) where the vertical motion is strong but stratification and the Earth's rotation are important factors. Since these motions are too small to be directly resolved by global ocean and climate models, understanding their impact on the structure and dynamics of the ocean is one of the most pressing topics in physical oceanography. Currently, he is studying the dynamics of upper ocean fronts, the turbulent boundary layer beneath melting ice shelves, stratified turbulence, and the influence of physical processes on biogeochemical dynamics. Please see his homepage here for more information. https://www.damtp.cam.ac.uk/person/jrt51 

Abstract

Global scale ocean currents are strongly constrained by the Earth’s rotation, while this effect is generally negligible at small scales. In between, motions with scales from 1-10km are marginally affected by the Earth’s rotation. These intermediate scales, collectively termed the ocean submesoscale, have been hidden from view until recent years. Evidence from field measurements, numerical models, and satellite data have shown that submesoscales play a particularly important role in the upper ocean where they help to control the transport of material between the ocean surface and interior. In this talk I will review some recent work on submesoscale dynamics and their influence on biogeochemistry and accumulation of microplastics in the surface waters.

 

 

Thu, 01 Feb 2024

12:00 - 13:00
L3

Stop-and-go, hovercrafts and helicopters: the complex motility of droplet microswimmers driven by interfacial instabilities

Dr. Corinna Maaß
(University of Twente & Max Planck Institute for Dynamics and Self-Organization, Dynamics of Complex Fluids, Göttingen)
Abstract
In both experiment and numerics, active droplets are a simple but versatile toy model to study active processes from single agents to collective scales.
One hallmark of active or living matter lies in the conversion of microscopic free fuel energy to mesoscopic directed motion. Bio-microswimmers have evolved complex and sophisticated motility, like helical swimming or run-and-tumble dynamics, with similarly complex  mechanical or biochemical actuation.
However, similar periodic or chaotic motion may also arise simply from the nonlinear dynamics of fuel conversion that set autophoretic droplet swimmers in motion, leading to a wealth of biomimetic phenomena. In this talk, I will demonstrate how the interaction of a self-propelling droplet with its self-generated chemical and hydrodynamic environment generates swimming and pumping states, unsteady reorientation, helical dynamics and complex collective states.
Thu, 25 Jan 2024

12:00 - 13:00
L3

Collective motion and environmental path entropy

Matthew Turner
(University of Warwick)
Further Information

Matthew Turner is a Professor in the Physics department, attached to the Complexity center, at Warwick University. He works on Biological and Soft Matter Physics, amongst other things.

Abstract

 

We study “bottom-up” models for the collective motion of large groups of animals. Similar models can be encoded into (micro)robotic matter, capable of sensing light and processing information. Agents are endowed only with visual sensing and information processing. We study a model in which moving agents reorientate to maximise the path-entropy of their visual environment over paths into the future. There are general arguments that principles like this that are based on retaining freedom in the future may confer fitness in an uncertain world. Alternative “top-down” models are more common in the literature. These typically encode coalignment and/or cohesion directly and are often motivated by models drawn from physics, e.g. describing spin systems. However, such models can usually give little insight into how co-alignment and cohesion emerge because these properties are encoded in the model at the outset, in a top-down manner. We discuss how our model leads to dynamics with striking similarities with animal systems, including the emergence of coalignment, cohesion, a characteristic density scaling anddifferent behavioural phenotypes. The dynamics also supports a very unusual order-disorder transition in which the order (coalignment) initially increases upon the addition of sensory or behavioural noise, before decreasing as the noise becomes larger.

 

 

Thu, 18 Jan 2024

12:00 - 13:00
L3

Coupling rheology and segregation in granular flows

Nico Gray
(University of Manchester)
Further Information

Professor Nico Gray is based in the Department of Mathematics at the University of Manchester. 

This is from his personal website:

My research interests lie in understanding and modelling the flow of granular materials, in small scale experiments, industrial processes and geophysical flows.

[Mixing in a rotating drum][Flow past a rearward facing pyramid]

Current research is aimed at understanding fundamental processes such as the flow past obstacles, shock waves, dead-zones, fluid-solid phase transitions, particle size segregation and pattern formation. A novel and important feature of all my work is the close interplay of theory, numerical computation and experiment to investigate these nonlinear systems. I currently have three active experiments which are housed in two laboratories at the Manchester Centre for Nonlinear Dynamics. You can click on the videos and pictures as well as the adjacent toolbar to find out more about specific problems that I am interested in.

Abstract

During the last fifteen years, there has been a paradigm shift in the continuum modelling of granular materials; most notably with the development of rheological models, such as the μ(I)-rheology (where μ is the friction and I is the inertial number), but also with significant advances in theories for particle segregation. This talk details theoretical and numerical frameworks (based on OpenFOAM®) which unify these disconnected endeavours. Coupling the segregation with the flow, and vice versa, is not only vital for a complete theory of granular materials, but is also beneficial for developing numerical methods to handle evolving free surfaces. This general approach is based on the partially regularized incompressible μ(I)-rheology, which is coupled to a theory for gravity/shear-driven segregation (Gray & Ancey, J. Fluid Mech., vol. 678, 2011, pp. 353–588). These advection–diffusion–segregation equations describe the evolving concentrations of the constituents, which then couple back to the variable viscosity in the incompressible Navier–Stokes equations. A novel feature of this approach is that any number of differently sized phases may be included, which may have disparate frictional properties. The model is used to simulate the complex particle-size segregation patterns that form in a partially filled triangular rotating drum. There are many other applications of the theory to industrial granular flows, which are the second most common material used after fluids. The same processes also occur in geophysical flows, such as snow avalanches, debris flows and dense pyroclastic flows. Depth-averaged models, that go beyond the μ(I)-rheology, will also be derived to capture spontaneous self-channelization and levee formation, as well as complex segregation-induced flow fingering effects, which enhance the run-out distance of these hazardous flows.

 

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Thu, 30 Nov 2023

12:00 - 13:00
L1

Droplet dynamics in the presence of gas nanofilms: merging, wetting, bouncing & levitation

James Sprittles
(University of Warwick)
Abstract

Recent advances in experimental techniques have enabled remarkable discoveries and insight into how the dynamics of thin gas/vapour films can profoundly influence the behaviour of liquid droplets: drops impacting solids can “skate on a film of air” [1], so that they can “bounce off walls” [2,3]; reductions in ambient gas pressure can suppress splashing [4] and initiate the merging of colliding droplets [5]; and evaporating droplets can levitate on their own vapour film [7] (the Leidenfrost effect). Despite these advances, the precise physical mechanisms governing these phenomena remains a topic of debate.  A theoretical approach would shed light on these issues, but due to the strongly multiscale nature of these processes brute force computation is infeasible.  Furthermore, when films reach the scale of the mean free path in the gas (i.e. ~100nm) and below, new nanoscale physics appears that renders the classical Navier-Stokes paradigm inaccurate.

In this talk, I will overview our development of efficient computational models for the aforementioned droplet dynamics in the presence of gas nanofilms into which gas-kinetic, van der Waals and/or evaporative effects can be easily incorporated [8,9].  It will be shown that these models can reproduce experimental observations – for example, the threshold between bouncing and wetting for drop impact on a solid is reproduced to within 5%, whilst a model excluding either gas-kinetic or van der Waals effects is ~170% off!  These models will then be exploited to make new experimentally-verifiable predictions, such as how we expect drops to behave in reduced pressure environments.  Finally, I will conclude with some exciting directions for future wor


[1] JM Kolinski et al, Phys. Rev. Lett.  108 (2012), 074503. [2] JM Kolinski et al, EPL.  108 (2014), 24001. [3] J de Ruiter et al, Nature Phys.  11 (2014), 48. [4] L Xu et al, Phys. Rev. Lett. 94 (2005), 184505. [5] J Qian & CK Law, J. Fluid. Mech. 331 (1997), 59.  [6] KL Pan J. Appl. Phys. 103 (2008), 064901. [7] D Quéré, Ann. Rev. Fluid Mech. 45 (2013), 197. [8] JE Sprittles, Phys. Rev. Lett.  118 (2017), 114502.  [9] MV Chubynsky et al, Phys. Rev. Lett.. 124 (2020), 084501.
Thu, 23 Nov 2023

12:00 - 13:00
L1

Financial Health in Banking - combining automation and optimisation techniques in a multi-problem setup

Kal BUKOVSKI
(Sopra Steria)
Abstract

Predictive scoring modelling is a common approach to measure financial health and credit worthiness in banking. Whilst the latter is a key factor in making decisions for lending, evaluating financial health helps to identify vulnerable customers trending towards financial hardship, who need support. The current macroeconomic uncertainties amplify the importance of extensive flexibility in modelling data solutions so that they can remain effective and adaptive to a volatile economic environment. This workshop is focused on discussing relevant techniques and mathematical methodologies which can help modernise traditional scoring models and accelerate innovation. In summary, the problem definition in the banking context is how automation and optimality can be achieved in a multiobjective problem where a subset of existing data features should be selected by relevance and uniqueness, assigned scoring weights by importance and how a pool of customers can be categorised accordingly using their individual scores and auto-adjusting thresholds of risk classification scales. The key challenge is imposed by the mutual dependency of the three sub-problems and their objectives. Introducing or removing constraints in any of them can change the feasibility and optimality of the others and the overall solution. It is common for traditional scoring models to be mainly focused on the predictive accuracy and their setup is often defined and revised manually, following ad-hoc exploratory data analysis and business-led decision making. An automated optimisation of the data features’ selection, scoring weights and classification thresholds definition can achieve respectively: ▪ Precise financial health evaluation and book classification under changing economic climate; ▪ Development of innovative data-driven solutions to enhance prevention from financial hardship and bankruptcies.

Thu, 16 Nov 2023

12:00 - 13:00
L1

Elastocapillary windlass in one and two dimensions

Sébastien Neukirch
(Sorbonne Jean Le Rond d’Alembert Lab)
Abstract

Capillary forces acting at the surface of a liquid drop can be strong enough to deform small objects and recent studies have provided several examples of elastic instabilities induced by surface tension. Inspired by the windlass mechanism in spider webs, we present a system where a liquid drop sits on a straight fiber and attracts the fiber which thereby coils inside the drop. We then introduce a 2D extension of the mechanism and build a membrane that can extend/contract by a factor of 20.

Thu, 09 Nov 2023

12:00 - 13:00
L1

Reframing biological function as a learning problem

Andrea Liu
(University of Pennsylvania)
Further Information

Andrea Jo-Wei Liu is the Hepburn Professor of Physics at the University of Pennsylvania, where she holds a joint appointment in the Department of Chemistry. She is a theoretical physicist studying condensed matter physics and biophysics.

Abstract

In order for artificial neural networks to learn a task, one must solve an inverse design problem. What network will produce the desired output? We have harnessed AI approaches to design physical systems to perform functions inspired by biology, such as protein allostery. But artificial neural networks require a computer in order to learn in top-down fashion by the global process of gradient descent on a cost function. By contrast, the brain learns by local rules on its own, with each neuron adjusting itself and its synapses without knowing what all the other neurons are doing, and without the aid of an external computer. But the brain is not the only biological system that learns by local rules; I will argue that the actin cortex and the amnioserosa during the dorsal closure stage of Drosophila development can also be viewed this way.

 

Thu, 02 Nov 2023

12:00 - 13:00
L1

Model and data fusion: physics-driven learning in cancer research

Pasquale Ciarletta
(MOX Laboratory, Politecnico di Milano, Italy)
Abstract

The key role of physical and mechanical interactions in cancer emerges from a very large variety of data sources and methods - from genomics to bioimaging, from proteomics to clinical records. Thus, learning physics-driven relational information is crucial to characterize its progression at different scales.

In this talk I will discuss how mathematical and computational tools allow for learning  and better understanding of  the mechano-biology of cancer thanks to the integration of  patient-specific data and physics-based models. I will present a few applications developed in the last decade in which the development of  digital twins,  empowered by ad-hoc learning tools,  allows us to test new hypotheses,  to assess the model predictions against biological and clinical data, and to aid decision-making in a clinical setting.

Funding from MUR - PRIN 2020, Progetto di Eccellenza 2023-2027 and Regione Lombardia (NEWMED Grant, ID: 117599, POR FESR 2014-2020) is gratefully acknowledged.
Thu, 26 Oct 2023

12:00 - 13:00
L1

Adjoint-accelerated Bayesian Inference for joint reconstruction and segmentation of Flow-MRI images

Matthew Juniper
(University of Cambridge)
Abstract

We formulate and solve a generalized inverse Navier–Stokes boundary value problem for velocity field reconstruction and simultaneous boundary segmentation of noisy Flow-MRI velocity images. We use a Bayesian framework that combines CFD, Gaussian processes, adjoint methods, and shape optimization in a unified and rigorous manner.
With this framework, we find the velocity field and flow boundaries (i.e. the digital twin) that are most likely to have produced a given noisy image. We also calculate the posterior covariances of the unknown parameters and thereby deduce the uncertainty in the reconstructed flow. First, we verify this method on synthetic noisy images of flows. Then we apply it to experimental phase contrast magnetic resonance (PC-MRI) images of an axisymmetric flow at low and high SNRs. We show that this method successfully reconstructs and segments the low SNR images, producing noiseless velocity fields that match the high SNR images, using 30 times less data.
This framework also provides additional flow information, such as the pressure field and wall shear stress, accurately and with known error bounds. We demonstrate this further on a 3-D in-vitro flow through a 3D-printed aorta and 3-D in-vivo flow through a carotid artery.